RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PDSS2Q86YH6 399 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 PSTKQ8IV42 348 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ZBTB8OSQ8IWT0 167 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 KIAA0319LQ8IZA0 1049 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SLC39A11Q8N1S5 342 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ICA1LQ8NDH6 482 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 RBM15BQ8NDT2 890 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 RDH11Q8TC12 318 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SPATA18Q8TC71 538 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 FAF2Q96CS3 445 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ANKRD36BP1Q96IX9 119 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ZSWIM3Q96MP5 696 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 RILPQ96NA2 401 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ZNF670Q9BS34 389 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 HAUS8Q9BT25 410 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 PI4K2AQ9BTU6 479 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 NMUR2Q9GZQ4 415 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SDCBP2Q9H190 292 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ZWILCHQ9H900 591 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SFXN1Q9H9B4 322 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 TOPORSQ9NS56 1045 aaPredicted RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 CISHQ9NSE2 258 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 IGSF9Q9P2J2 1179 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 RCOR3Q9P2K3 495 aaPredicted RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SLC17A7Q9P2U7 560 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 GABBR1Q9UBS5 961 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 WNT16Q9UBV4 365 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 CNOT11Q9UKZ1 510 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 RAB26Q9ULW5 256 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ARHGAP26Q9UNA1 814 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 MAD1L1Q9Y6D9 718 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SF3B1O75533 1304 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 CNTNAP2Q9UHC6 1331 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 GVINP1Q7Z2Y8 2422 aa5.96□□□□□ -1.45
VPS33B-203ENST00000554264 IGKV6D-21A0A0A0MT36 114 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 F8VP50 259 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 H3BNX3 289 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 APOL1O14791 398 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 MDM4O15151 490 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 GSTA4O15217 222 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 PRPSAP2O60256 369 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 GCATO75600 419 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ALDH1A2O94788 518 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 TMEM63AO94886 807 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 TNFAIP8O95379 198 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 TRUB2O95900 331 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ZBED1O96006 694 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ENO1P06733 434 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ZSCAN5DPP0CG00 497 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 CTSAP10619 480 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 THRAP10827 490 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 VDRP11473 427 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 GPD1P21695 349 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 PBX3P40426 434 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 MAGEA3P43357 314 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 RPL5P46777 297 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 CHN2P52757 468 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 AQP5P55064 265 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 PSMC1P62191 440 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 RPL7AP62424 266 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 CREB5Q02930 508 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 SF3A3Q12874 501 aaKnown RBP eCLIP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 HERC3Q15034 1050 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 CHI3L2Q15782 390 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 MMEL1Q495T6 779 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ANKRD20A4Q4UJ75 823 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF667Q5HYK9 610 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 IRAK1BP1Q5VVH5 260 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 CD276Q5ZPR3 534 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 CPZQ66K79 652 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 STEAP4Q687X5 459 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 PGM2L1Q6PCE3 622 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ABHD15Q6UXT9 468 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 KIAA0907Q7Z7F0 614 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 GPR149Q86SP6 731 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 DDX53Q86TM3 631 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ARID3BQ8IVW6 561 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 TMEM151BQ8IW70 566 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 CTAGE3PQ8IX95 158 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 AHI1Q8N157 1196 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 SYNPOQ8N3V7 929 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 MARVELD2Q8N4S9 558 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 C12orf76Q8N812 135 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 GLIS1Q8NBF1 620 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 SYT8Q8NBV8 401 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 SLC22A17Q8WUG5 538 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 NRG4Q8WWG1 115 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ITFG2Q969R8 447 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 DGCR14Q96DF8 476 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 MCRS1Q96EZ8 462 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 SERAC1Q96JX3 654 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 LRGUKQ96M69 825 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ACAP3Q96P50 834 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 EBNA1BP2Q99848 306 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 RTKNQ9BST9 563 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 THTPAQ9BU02 230 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 MRPS26Q9BYN8 205 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ZBP1Q9H171 429 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms