RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PIAS2O75928 621 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 CLDN7O95471 211 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 ASMTLO95671 621 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 MT-CYBP00156 380 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-209ENST00000553855 EPOP01588 193 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 SLC4A1P02730 911 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 FGF1P05230 155 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 HOXC4P09017 264 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-209ENST00000553855 EDN3P14138 238 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 NME1P15531 152 aaKnown RBP8.31□□□□□ -1.08
PSEN1-209ENST00000553855 DGKAP23743 735 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 WNT3AP56704 352 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 KIAA1024LP59773 190 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 SRP54P61011 504 aaKnown RBP8.31□□□□□ -1.08
PSEN1-209ENST00000553855 FZD2Q14332 565 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 LONRF2Q1L5Z9 754 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 P3H1Q32P28 736 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 CCDC157Q569K6 752 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 ANKRD20A2Q5SQ80 823 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 ANKRD20A1Q5TYW2 823 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 ANKRD20A3Q5VUR7 823 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 ZDHHC20Q5W0Z9 365 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 AADACL2Q6P093 401 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 Q6ZVL8 140 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF765Q7L2R6 523 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 GSTA5Q7RTV2 222 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 HSD11B1LQ7Z5J1 315 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 TSPAN33Q86UF1 283 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 GKN2Q86XP6 184 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 SLC13A5Q86YT5 568 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-209ENST00000553855 SLC25A41Q8N5S1 370 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 CCDC89Q8N998 374 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 IPMKQ8NFU5 416 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 OR56A4Q8NGH8 313 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 VOPP1Q96AW1 172 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 TBATAQ96M53 351 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 SPATA13Q96N96 652 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 CAMK1GQ96NX5 476 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 LYSMD1Q96S90 227 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 NAP1L3Q99457 506 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-209ENST00000553855 FAM118BQ9BPY3 351 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 GBA3Q9H227 469 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 FAM83DQ9H4H8 585 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 MAGEE1Q9HCI5 957 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 CUEDC1Q9NWM3 386 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-209ENST00000553855 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.31□□□□□ -1.08
PSEN1-209ENST00000553855 JRKLQ9Y4A0 524 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 CSNK1G3Q9Y6M4 447 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF292O60281 2723 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 DMDP11532 3685 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 GON4LQ3T8J9 2241 aa8.31□□□□□ -1.08
PSEN1-209ENST00000553855 SPTBN4Q9H254 2564 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 C5orf60A6NFR6 353 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 C2orf81A6NN90 581 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 F5H423 210 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-209ENST00000553855 ENC1O14682 589 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 TNFRSF10CO14798 259 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 SCAMP1O15126 338 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 MAN1A2O60476 641 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 SASH3O75995 380 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 PRLP01236 227 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 IFNB1P01574 187 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 MMP2P08253 660 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 ADRB1P08588 477 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 C1SP09871 688 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 FTH1P19P0C7X4 201 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 FAM157BP0CG42 384 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 MYCLP1P12525 358 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-209ENST00000553855 LHCGRP22888 699 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 TEAD1P28347 426 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 HK3P52790 923 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 STC1P52823 247 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 PDE1BQ01064 536 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 PTSQ03393 145 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 DPTQ07507 201 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 CCDC173Q0VFZ6 552 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 BIRC2Q13490 618 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 PARP6Q2NL67 630 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 PRRT3Q5FWE3 981 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF569Q5MCW4 686 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 N4BP2L1Q5TBK1 243 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-209ENST00000553855 FIGNL1Q6PIW4 674 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 DBX2Q6ZNG2 339 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 GLT6D1Q7Z4J2 308 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 GLRX5Q86SX6 157 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 HEATR4Q86WZ0 1026 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 SLC22A18ASQ8N1D0 253 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 SDR16C5Q8N3Y7 309 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 FAM71DQ8N9W8 422 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 PLA2G15Q8NCC3 412 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF548Q8NEK5 533 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-209ENST00000553855 OR4C6Q8NH72 309 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 CCDC110Q8TBZ0 833 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 BLOC1S5Q8TDH9 187 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 PBKQ96KB5 322 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 NSMCE3Q96MG7 304 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 FICDQ9BVA6 458 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 RIOK2Q9BVS4 552 aaKnown RBP8.3□□□□□ -1.08
PSEN1-209ENST00000553855 SPATA16Q9BXB7 569 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 GSX2Q9BZM3 304 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms