RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 UGP2Q16851 508 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 TEX35Q5T0J7 233 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 PIP5KL1Q5T9C9 394 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 DENND2CQ68D51 928 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 PRICKLE2Q7Z3G6 844 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 GLIS1Q8NBF1 620 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 IFI44Q8TCB0 444 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 MAPK15Q8TD08 544 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 BLOC1S5Q8TDH9 187 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 SLCO2A1Q92959 643 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 SNF8Q96H20 258 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 PRR11Q96HE9 360 aaPredicted RBP11.36□□□□□ -0.59
TMEM116-218ENST00000552839 SRPK1Q96SB4 655 aaKnown RBP11.36□□□□□ -0.59
TMEM116-218ENST00000552839 MLPHQ9BV36 600 aaPredicted RBP11.36□□□□□ -0.59
TMEM116-218ENST00000552839 GPR63Q9BZJ6 419 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 DPH5Q9H2P9 285 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 PCDH12Q9NPG4 1184 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 MAST4O15021 2626 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-218ENST00000552839 C1orf232A0A0U1RR37 186 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 A0A1W2PQU0 124 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 TSPAN11A1L157 253 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 PMS2P1A4D2B8 440 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 K7ESM1 405 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 SCAMP1O15126 338 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 HTRA2O43464 458 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-218ENST00000552839 HEXIM1O94992 359 aaKnown RBP11.35□□□□□ -0.59
TMEM116-218ENST00000552839 MMP2P08253 660 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 TPSB2P20231 275 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 RBMS1P29558 406 aaKnown RBP11.35□□□□□ -0.59
TMEM116-218ENST00000552839 VIPR1P32241 457 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 CSRP3P50461 194 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 DUSP3P51452 185 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-218ENST00000552839 CLDN2P57739 230 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 MRPS25P82663 173 aaKnown RBP11.35□□□□□ -0.59
TMEM116-218ENST00000552839 CDH17Q12864 832 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 SGCGQ13326 291 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 TPSAB1Q15661 275 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 ZNF284Q2VY69 593 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 ZNF542PQ5EBM4 170 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 KDELC1Q6UW63 502 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 GLT6D1Q7Z4J2 308 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 PPIL6Q8IXY8 311 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 SLC22A18ASQ8N1D0 253 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 ATXN7L3BQ96GX2 97 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 MRGPRX2Q96LB1 330 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 WRAP53Q9BUR4 548 aaKnown RBP11.35□□□□□ -0.59
TMEM116-218ENST00000552839 DUSP23Q9BVJ7 150 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 C1QTNF7Q9BXJ2 289 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 TRIM4Q9C037 500 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 EIF2B3Q9NR50 452 aaKnown RBP11.35□□□□□ -0.59
TMEM116-218ENST00000552839 HACD3Q9P035 362 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 SAMD15Q9P1V8 674 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 B4GALT6Q9UBX8 382 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 ZFR2Q9UPR6 939 aaKnown RBP11.35□□□□□ -0.59
TMEM116-218ENST00000552839 ENTPD2Q9Y5L3 495 aa11.35□□□□□ -0.59
TMEM116-218ENST00000552839 A0A0J9YYE9 177 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 NEMP2A6NFY4 417 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 A8MX80 341 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 CDRT15L2A8MXV6 281 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 GOLGA8MH3BSY2 632 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 SMAPO00193 183 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 TRAFD1O14545 582 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 DNALI1O14645 258 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 TSPAN6O43657 245 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 SLU7O95391 586 aaKnown RBP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 AGTP01019 485 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 TRBC1P01850 177 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 PDHA1P08559 390 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 ALPIP09923 528 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 PIRTP0C851 137 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 TIMP2P16035 220 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 HNRNPA2B1P22626 353 aaKnown RBP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 AKT2P31751 481 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 ABL2P42684 1182 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 PTGIRP43119 386 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 SESN2P58004 480 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 CDK16Q00536 496 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 GUCY2DQ02846 1103 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 SRSF1Q07955 248 aaKnown RBP eCLIP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 NFATC3Q12968 1075 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 LAMB3Q13751 1172 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 HLTFQ14527 1009 aaKnown RBP eCLIP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 ACOX1Q15067 660 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 SLC1A5Q15758 541 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 CDKN3Q16667 212 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 QPCTQ16769 361 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 GLE1Q53GS7 698 aaKnown RBP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 DNAJC21Q5F1R6 531 aaKnown RBP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 SIRPB2Q5JXA9 342 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 KIAA1161Q6NSJ0 714 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 NEK5Q6P3R8 708 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 CASC4Q6P4E1 433 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 CCDC81Q6ZN84 652 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 GCNT7Q6ZNI0 430 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 DPPA4Q7L190 304 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 HORMAD1Q86X24 394 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 MMGT1Q8N4V1 131 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 EXD3Q8N9H8 876 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 PPHLN1Q8NEY8 458 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms