RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 OSBPL9Q96SU4 736 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 TMEM168Q9H0V1 697 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 RAB6BQ9NRW1 208 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 TRNAU1APQ9NX07 287 aaKnown RBP18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 IL17CQ9P0M4 197 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 VPS18Q9P253 973 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 GPR34Q9UPC5 381 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 GPSM3Q9Y4H4 160 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 ARL5AQ9Y689 179 aa18.34■□□□□ 0.53
PRPF40B-216ENST00000552301 SCN8AQ9UQD0 1980 aa18.33■□□□□ 0.53
PRPF40B-216ENST00000552301 GOLGA6L10A0A0M3HER8 536 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 GLYATL1P3A0A0U1RQE8 302 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 BUD23O43709 281 aaKnown RBP18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 HYAL3O43820 417 aaPredicted RBP18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 CKMT1AP12532 417 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 ETS1P14921 441 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 ACP1P24666 158 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 PEX6Q13608 980 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 KCTD11Q693B1 232 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 C4orf22Q6V702 233 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 PPP1R21Q6ZMI0 780 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 CHCHD4Q8N4Q1 142 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 FAM46DQ8NEK8 389 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 GDAP1Q8TB36 358 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 BRSK1Q8TDC3 778 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 GLYATL1Q969I3 302 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 MS4A14Q96JA4 679 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 ETNK1Q9HBU6 452 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 ARNT2Q9HBZ2 717 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 SIRPGQ9P1W8 387 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 GULP1Q9UBP9 304 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 TTC7AQ9ULT0 858 aaPredicted RBP18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 SNX12Q9UMY4 172 aa18.33■□□□□ 0.52
PRPF40B-216ENST00000552301 TCP1P17987 556 aaKnown RBP18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 KCNJ1P48048 391 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 ITGA9Q13797 1035 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 SEPT6Q14141 434 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 DHRS13Q6UX07 377 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 FAM151BQ6UXP7 276 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 RAB44Q7Z6P3 723 aaPredicted RBP18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 ARL10Q8N8L6 244 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 PRELID2Q8N945 189 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 DNAAF3Q8N9W5 541 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 NAT6Q93015 286 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 MAGOHBQ96A72 148 aaKnown RBP18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 BOCQ9BWV1 1114 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 RMI1Q9H9A7 625 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 ZNHIT2Q9UHR6 403 aa18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 CNOT6Q9ULM6 557 aaKnown RBP18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 OAS3Q9Y6K5 1087 aaKnown RBP18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
PRPF40B-216ENST00000552301 CPED1A4D0V7 1026 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 B4DGG1 531 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 CES2O00748 559 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 DKK1O94907 266 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 APRTP07741 180 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 MYF5P13349 255 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 ADCY8P40145 1251 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 BASP1P80723 227 aaKnown RBP18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 SHC2P98077 582 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 E2F1Q01094 437 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 CDH17Q12864 832 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 SEMA5AQ13591 1074 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 GTF2H3Q13889 308 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 LRP8Q14114 963 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 DENND5AQ6IQ26 1287 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 PRUNE1Q86TP1 453 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 SLC35F3Q8IY50 421 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 GALNT15Q8N3T1 639 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 KYQ8NBH2 561 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 OR4K2Q8NGD2 314 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 COG1Q8WTW3 980 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 PTCD2Q8WV60 388 aaKnown RBP18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 VPS35Q96QK1 796 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 SCNM1Q9BWG6 230 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 AP1M1Q9BXS5 423 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 ZCCHC2Q9C0B9 1178 aaKnown RBP18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 OR2AG1Q9H205 316 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 DPEP2Q9H4A9 486 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 ARFGAP3Q9NP61 516 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 IL26Q9NPH9 171 aa18.31■□□□□ 0.52
PRPF40B-216ENST00000552301 GPR89AB7ZAQ6 455 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 PRAMEF1O95521 474 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 ZSCAN5DPP0CG00 497 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 GPR89BP0CG08 455 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 TPH1P17752 444 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 SPINK2P20155 84 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 RPL22P35268 128 aaKnown RBP18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 HADHAP40939 763 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 ACTR1BP42025 376 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 ACTR1AP61163 376 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 POU6F1Q14863 301 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 CHRNA6Q15825 494 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 ATP13A5Q4VNC0 1218 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 PYCR3Q53H96 274 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 SLC30A9Q6PML9 568 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 EFL1Q7Z2Z2 1120 aaKnown RBP18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 GLIS1Q8NBF1 620 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 CCL4L1Q8NHW4 92 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 IFI44Q8TCB0 444 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms