RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ACSL5Q9ULC5 683 aa4.07□□□□□ -1.76
LSM6P2-201ENST00000552208 LIPT1Q9Y234 373 aa4.07□□□□□ -1.76
LSM6P2-201ENST00000552208 ASTN2O75129 1339 aaPredicted RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 A0A087WV48 116 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 KANSL1LA0AUZ9 987 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 GTPBP10A4D1E9 387 aaKnown RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 ANXA2P2A6NMY6 339 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 STX6O43752 255 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 SLC22A3O75751 556 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 NDUFB4O95168 129 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 ZWINTO95229 277 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 LINGO3P0C6S8 592 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 MYF6P23409 242 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 YWHAHQ04917 246 aaPredicted RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 SCN1BQ07699 218 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 GRIK2Q13002 908 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 MYLK3Q32MK0 819 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 ODF2Q5BJF6 829 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 C6orf163Q5TEZ5 329 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 SIGIRRQ6IA17 410 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 HEPHL1Q6MZM0 1159 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 METTL2BQ6P1Q9 378 aaKnown RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 PAPD4Q6PIY7 484 aaKnown RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 FAM198BQ6UWH4 519 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 LINC00696Q6ZRV3 163 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 OTOAQ7RTW8 1153 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 CACNA2D4Q7Z3S7 1137 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 SPATA19Q7Z5L4 167 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 ADCK2Q7Z695 626 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 SPRED1Q7Z699 444 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 FAM217AQ8IXS0 508 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 ZNF595Q8IYB9 648 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 CCAR2Q8N163 923 aaKnown RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 TMCO5AQ8N6Q1 288 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 IQUBQ8NA54 791 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 TMEM163Q8TC26 289 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 BICD2Q8TD16 824 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 GPT2Q8TD30 523 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 MGARPQ8TDB4 240 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 ERGIC1Q969X5 290 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 SPACA9Q96E40 222 aaPredicted RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 METTL2AQ96IZ6 378 aaKnown RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 NUDCD1Q96RS6 583 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 SH2D3AQ9BRG2 576 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 PI4K2AQ9BTU6 479 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 MLPHQ9BV36 600 aaPredicted RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 PCED1AQ9H1Q7 454 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 AAMDCQ9H7C9 122 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 DNAJC18Q9H819 358 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 MMP25Q9NPA2 562 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 NRIP3Q9NQ35 241 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 SEMA4GQ9NTN9 838 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 ACSS1Q9NUB1 689 aaPredicted RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 PRMT7Q9NVM4 692 aaPredicted RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 DDX43Q9NXZ2 648 aaKnown RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 CISD1Q9NZ45 108 aaKnown RBP4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 TSPYL4Q9UJ04 414 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 PACSIN3Q9UKS6 424 aa4.06□□□□□ -1.76
LSM6P2-201ENST00000552208 IGSF1Q8N6C5 1336 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 ENO4A6NNW6 628 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 KDM4EB2RXH2 506 aaPredicted RBP4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 C19orf81C9J6K1 198 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 F8W810 466 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 STMND1H3BQB6 276 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 CLIC2O15247 247 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 TLX3O43711 291 aaPredicted RBP4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 LATS1O95835 1130 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 GH2P01242 217 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 MT-ND3P03897 115 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 SUPT20HL2P0C7V6 817 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 PFKFB1P16118 471 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 PROZP22891 400 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 GPTP24298 496 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 TNFRSF8P28908 595 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 PPP3CCP48454 512 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 BMXP51813 675 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 LIMK1P53667 647 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 RAD23BP54727 409 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 BPIFB3P59826 476 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 RBPJQ06330 500 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 PTPRCAPQ14761 206 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 SMTNL2Q2TAL5 461 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 VWC2Q2TAL6 325 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 SUPT20HL1Q3ZLR7 823 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 SLC9C1Q4G0N8 1177 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 KRTCAP3Q53RY4 240 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 C6orf136Q5SQH8 315 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 AKNAD1Q5T1N1 836 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 GGNBP1Q5YKI7 109 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 NSUN5P2Q63ZY6 315 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 PLA2G4FQ68DD2 849 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 SUMO4Q6EEV6 95 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 MSANTD1Q6ZTZ1 278 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 INTS8Q75QN2 995 aaKnown RBP4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 CENPVQ7Z7K6 275 aaPredicted RBP4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 MB21D2Q8IYB1 491 aaPredicted RBP4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 NDUFAF2Q8N183 169 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 SIX6OS1Q8N1H7 587 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 GALNT16Q8N428 558 aa4.05□□□□□ -1.76
LSM6P2-201ENST00000552208 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms