RNA–Protein interactions for RNA: ENST00000551692.5

PACS2-211, Transcript of phosphofurin acidic cluster sorting protein 2, human

TSL 2

Gene PACS2, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACS2-211	ENST00000551692	POLH	Q9Y253	713 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	PCDHA11	Q9Y5I1	949 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	COL4A3	Q01955	1670 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	CST8	O60676	142 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	TCEA3	O75764	348 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	IGLV3-27	P01718	113 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	GLRB	P48167	497 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	GNG2	P59768	71 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	KCNC3	Q14003	757 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	GEN1	Q17RS7	908 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	LGSN	Q5TDP6	509 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	TCAIM	Q8N3R3	496 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	OR5H6	Q8NGV6	325 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	DCAKD	Q8WVC6	231 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	NTAN1	Q96AB6	310 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	SGF29	Q96ES7	293 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	LOC105371267	A0A1B0GV96	52 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	SOCS2	O14508	198 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	ALOX15B	O15296	676 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	ARSA	P15289	507 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	IDH3A	P50213	366 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	CCDC14	Q49A88	953 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	RWDD4	Q6NW29	188 aa	Known RBP	13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	DARS2	Q6PI48	645 aa	Known RBP	13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	TAS1R1	Q7RTX1	841 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	GALNT7	Q86SF2	657 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	RFX6	Q8HWS3	928 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	RHOT1	Q8IXI2	618 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	TCEAL8	Q8IYN2	117 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	NETO2	Q8NC67	525 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	TANK	Q92844	425 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	CLSTN3	Q9BQT9	956 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	CNPY3	Q9BT09	278 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	NDFIP2	Q9NV92	336 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	TJP2	Q9UDY2	1190 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	FETUB	Q9UGM5	382 aa		13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	AFF4	Q9UHB7	1163 aa	Known RBP	13.78	□□□□□ -0.2
PACS2-211	ENST00000551692	MTMR11	A4FU01	709 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	SDR42E2	A6NKP2	422 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	CENPX	A8MT69	81 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	CYP7B1	O75881	506 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	TMEM63A	O94886	807 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	PRDX6	P30041	224 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	HTR2B	P41595	481 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	PLIN5	Q00G26	463 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	SEMA3B	Q13214	749 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	ZMYND11	Q15326	602 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	IGSF11	Q5DX21	431 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	EFHC2	Q5JST6	749 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	DEFB128	Q7Z7B8	93 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	ABI1	Q8IZP0	508 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	TMEM209	Q96SK2	561 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	COG4	Q9H9E3	785 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	GMIP	Q9P107	970 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	ZNHIT2	Q9UHR6	403 aa		13.77	□□□□□ -0.2
PACS2-211	ENST00000551692	HTRA2	O43464	458 aa	Predicted RBP	13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	HOXC13	P31276	330 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	HTR7	P34969	479 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	ERVK-21	P61565	698 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	RPL7A	P62424	266 aa	Known RBP	13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	ZNF267	Q14586	743 aa	Predicted RBP	13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	ZFP69	Q49AA0	526 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	FAM219B	Q5XKK7	198 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	PIGZ	Q86VD9	579 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	GALNT12	Q8IXK2	581 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	BIRC7	Q96CA5	298 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	NRBF2	Q96F24	287 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	PGLYRP2	Q96PD5	576 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	LMAN2L	Q9H0V9	348 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	ACSS3	Q9H6R3	686 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	CCDC167	Q9P0B6	97 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692		F8VP50	259 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	MSI1	O43347	362 aa	Known RBP	13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	HOXA9	P31269	272 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	MATK	P42679	507 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	HSPA13	P48723	471 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	EPHA5	P54756	1037 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	SLC12A2	P55011	1212 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	COL19A1	Q14993	1142 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	C5orf22	Q49AR2	442 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	TRMT10B	Q6PF06	316 aa	Known RBP	13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	ADGRD1	Q6QNK2	874 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	FRA10AC1	Q70Z53	315 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	ADGRG6	Q86SQ4	1221 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	CCDC28A	Q8IWP9	274 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	FAM193B	Q96PV7	902 aa	Predicted RBP	13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	THAP1	Q9NVV9	213 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	SMOX	Q9NWM0	555 aa		13.77	□□□□□ -0.21
PACS2-211	ENST00000551692	TADA2A	O75478	443 aa		13.76	□□□□□ -0.21
PACS2-211	ENST00000551692	PPP3CC	P48454	512 aa		13.76	□□□□□ -0.21
PACS2-211	ENST00000551692	SLC9A3	P48764	834 aa		13.76	□□□□□ -0.21
PACS2-211	ENST00000551692	SLC25A52	Q3SY17	297 aa		13.76	□□□□□ -0.21
PACS2-211	ENST00000551692	KCTD4	Q8WVF5	259 aa		13.76	□□□□□ -0.21
PACS2-211	ENST00000551692	ATL1	Q8WXF7	558 aa		13.76	□□□□□ -0.21
PACS2-211	ENST00000551692	VPS33A	Q96AX1	596 aa		13.76	□□□□□ -0.21
PACS2-211	ENST00000551692	SIPA1	Q96FS4	1042 aa		13.76	□□□□□ -0.21
PACS2-211	ENST00000551692	LPIN3	Q9BQK8	851 aa		13.76	□□□□□ -0.21
PACS2-211	ENST00000551692	RIMS3	Q9UJD0	308 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms