RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	TMPRSS15	P98073	1019 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	PTK2B	Q14289	1009 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	SUZ12	Q15022	739 aa	Known RBP	11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	CHRNA6	Q15825	494 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	ATP13A5	Q4VNC0	1218 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	PERM1	Q5SV97	790 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	GUSBP11	Q6P575	273 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	DHRS13	Q6UX07	377 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	FAM151B	Q6UXP7	276 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	RAB44	Q7Z6P3	723 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	NLRP8	Q86W28	1048 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	NDUFAF2	Q8N183	169 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	KY	Q8NBH2	561 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	OR52K1	Q8NGK4	314 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	PATE1	Q8WXA2	126 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	SCARF2	Q96GP6	870 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	HIC2	Q96JB3	615 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	FSD1L	Q9BXM9	530 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	CARS2	Q9HA77	564 aa	Known RBP	11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	ARNT2	Q9HBZ2	717 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	MOSPD1	Q9UJG1	213 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	NEU2	Q9Y3R4	380 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	DGKB	Q9Y6T7	804 aa		11.13	□□□□□ -0.63
RAB5B-208	ENST00000550283	FAM149A	A5PLN7	773 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	LMO7DN	F2Z398	122 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	TNFSF14	O43557	240 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	STK10	O94804	968 aa	Known RBP	11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	AP2A1	O95782	977 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	ZNF8	P17098	575 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	HMGCL	P35914	325 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	ADCY8	P40145	1251 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	CDKN1C	P49918	316 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	ARSD	P51689	593 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	ZNF140	P52738	457 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	DCDC1	P59894	354 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	GNG11	P61952	73 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	XIAP	P98170	497 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	P3H1	Q32P28	736 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	CCDC38	Q502W7	563 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	PYCR3	Q53H96	274 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	CERCAM	Q5T4B2	595 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	XKR5	Q6UX68	686 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	ZNF534	Q76KX8	674 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	GLT6D1	Q7Z4J2	308 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	ADGRG6	Q86SQ4	1221 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	OR4K2	Q8NGD2	314 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	ZNF778	Q96MU6	729 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	BOC	Q9BWV1	1114 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	SPATA16	Q9BXB7	569 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	SLC13A1	Q9BZW2	595 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	FAM96A	Q9H5X1	160 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	RAB6B	Q9NRW1	208 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	NLGN3	Q9NZ94	848 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	PKD2L2	Q9NZM6	624 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	SIRPG	Q9P1W8	387 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	ATXN10	Q9UBB4	475 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	SPAST	Q9UBP0	616 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	SLC23A2	Q9UGH3	650 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	FKBPL	Q9UIM3	349 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	CSNK1G3	Q9Y6M4	447 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	USP24	Q9UPU5	2620 aa		11.12	□□□□□ -0.63
RAB5B-208	ENST00000550283	PLXNB3	Q9ULL4	1909 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	OR51F1	A6NGY5	319 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	TNFRSF10C	O14798	259 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	KIF5C	O60282	957 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	NOBOX	O60393	691 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	TNF	P01375	233 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	IVL	P07476	585 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	CKMT2	P17540	419 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	HTR1B	P28222	390 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	VPS41	P49754	854 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	CTBS	Q01459	385 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	SEMA5A	Q13591	1074 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	PEX6	Q13608	980 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	POU6F1	Q14863	301 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	CYP1B1	Q16678	543 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	ANKRD22	Q5VYY1	191 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	CREG2	Q8IUH2	290 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	ZNF547	Q8IVP9	402 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	TRAM1L1	Q8N609	369 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	CCHCR1	Q8TD31	782 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	GPBAR1	Q8TDU6	330 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	ADAMTS14	Q8WXS8	1223 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	GLYATL1	Q969I3	302 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	PBK	Q96KB5	322 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	DNAJC1	Q96KC8	554 aa	Known RBP	11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	CDC6	Q99741	560 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	SCNM1	Q9BWG6	230 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	OR2AG1	Q9H205	316 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	SLC2A6	Q9UGQ3	507 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	DRG1	Q9Y295	367 aa	Known RBP	11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	AAR2	Q9Y312	384 aa	Known RBP	11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	FREM2	Q5SZK8	3169 aa		11.11	□□□□□ -0.63
RAB5B-208	ENST00000550283	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms