RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	SLC38A5	Q8WUX1	472 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	APBB2	Q92870	758 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	TAAR8	Q969N4	342 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	LINGO1	Q96FE5	620 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	TMEM68	Q96MH6	324 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	ACOX2	Q99424	681 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	PCYT2	Q99447	389 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	SEBOX	Q9HB31	216 aa	Predicted RBP	4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	RRN3	Q9NYV6	651 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	SLC13A4	Q9UKG4	626 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	ACSL5	Q9ULC5	683 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	CAMK2A	Q9UQM7	478 aa		4.37	□□□□□ -1.71
CNOT2-222	ENST00000550155	GREB1L	Q9C091	1923 aa	Predicted RBP	4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	RRN3P2	A6NIE6	340 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	BLOC1S5-TXNDC5	H3BN57	136 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	IFNL4	K9M1U5	179 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	LDLRAD4	O15165	306 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF182	P17025	639 aa	Predicted RBP	4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	MLLT10	P55197	1068 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	PTP4A2	Q12974	167 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF280D	Q6N043	979 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	ATF7IP	Q6VMQ6	1270 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	DGLUCY	Q7Z3D6	616 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	OR5R1	Q8NH85	324 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	TAS1R2	Q8TE23	839 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	TM9SF4	Q92544	642 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	HTRA1	Q92743	480 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	SLC28A3	Q9HAS3	691 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	TCP11L1	Q9NUJ3	509 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	CYP46A1	Q9Y6A2	500 aa		4.36	□□□□□ -1.71
CNOT2-222	ENST00000550155	FAM237A	A0A1B0GTK4	181 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZCWPW2	A0A1B0GU75	182 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155		A0A1W2PQM1	296 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	UBA1	P22314	1058 aa	Known RBP	4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	ALDH4A1	P30038	563 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	AHR	P35869	848 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	PPIG	Q13427	754 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	OLIG2	Q13516	323 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	PRICKLE4	Q2TBC4	344 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	C14orf177	Q52M58	125 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	C18orf63	Q68DL7	685 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	DPPA4	Q7L190	304 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	STPG4	Q8N801	248 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	ACVR1C	Q8NER5	493 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	RDM1	Q8NG50	284 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF524	Q96C55	264 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	RHBDF1	Q96CC6	855 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	LGALS12	Q96DT0	336 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	SIL1	Q9H173	461 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	SLC25A18	Q9H1K4	315 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	LRMDA	Q9H2I8	198 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	TFB2M	Q9H5Q4	396 aa	Known RBP	4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	LTB4R2	Q9NPC1	389 aa		4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.35	□□□□□ -1.71
CNOT2-222	ENST00000550155	IGKV3D-15	A0A087WSY6	115 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	SMIM1	B2RUZ4	78 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	EIF3D	O15371	548 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	KCNN4	O15554	427 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	F9	P00740	461 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	NR2F2	P24468	414 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	UBA7	P41226	1012 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	PIP4K2A	P48426	406 aa	Predicted RBP	4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	KRTAP10-5	P60370	271 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	COG7	P83436	770 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	RPL24	P83731	157 aa	Known RBP	4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	ACVR2B	Q13705	512 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	FCN2	Q15485	313 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZRSR2	Q15696	482 aa	Known RBP	4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	ALG11	Q2TAA5	492 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF772	Q68DY9	489 aa	Predicted RBP	4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	TSSK4	Q6SA08	328 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	ARMC8	Q8IUR7	673 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	CPXCR1	Q8N123	301 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	SRBD1	Q8N5C6	995 aa	Known RBP	4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	ZNF485	Q8NCK3	441 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	ST8SIA4	Q92187	359 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	SMARCE1	Q969G3	411 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	RRNAD1	Q96FB5	475 aa	Known RBP	4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	C17orf77	Q96MU5	243 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	C1QTNF5	Q9BXJ0	243 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	EGLN1	Q9GZT9	426 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	GGA3	Q9NZ52	723 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	INTS6	Q9UL03	887 aa	Known RBP	4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155	ARHGAP26	Q9UNA1	814 aa		4.34	□□□□□ -1.71
CNOT2-222	ENST00000550155		A0A0G2JLW4	131 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	CTAGE9	A4FU28	777 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155		M0QZ24	198 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	TNFSF14	O43557	240 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	CTAGE8	P0CG41	777 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	CHRNB4	P30926	498 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	ARCN1	P48444	511 aa	Known RBP	4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	RARS	P54136	660 aa	Known RBP	4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	DRG2	P55039	364 aa	Known RBP	4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	CLDN20	P56880	219 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	CDC73	Q6P1J9	531 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	RAD9B	Q6WBX8	426 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	CTAGE4	Q8IX94	777 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	OR14L1P	Q8NHC6	308 aa		4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	PSPC1	Q8WXF1	523 aa	Known RBP	4.33	□□□□□ -1.72
CNOT2-222	ENST00000550155	NEUROD6	Q96NK8	337 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms