RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 CTRCQ99895 268 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 RMI1Q9H9A7 625 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 APMAPQ9HDC9 416 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 GOLGA6AQ9NYA3 693 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 VPS18Q9P253 973 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 TBC1D29Q9UFV1 150 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 ZNHIT2Q9UHR6 403 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 CNOT6Q9ULM6 557 aaKnown RBP9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 MYO6Q9UM54 1294 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 PLAAQ9Y263 795 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 LRRK2Q5S007 2527 aa9.77□□□□□ -0.85
TRAFD1-207ENST00000550051 USP9YO00507 2555 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 KIR2DS5A0A0G2JLQ3 304 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 A0A0G2JNG1 304 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 A0A0J9YYE9 177 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 A6NCN8 305 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 OR5K4A6NMS3 321 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 H3BRJ5 948 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 KIR2DS3K7RE56 304 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 MAP3K6O95382 1288 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 TRBC1P01850 177 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 FTLP02792 175 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 ANKRD34CP0C6C1 535 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 SLC2A4P14672 509 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 CTPS1P17812 591 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 AMPD1P23109 780 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 CES1P23141 567 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 MMP13P45452 471 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 STC1P52823 247 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 EMP3P54852 163 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 MAXP61244 160 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 UBXN1Q04323 297 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 KIR2DS5Q14953 304 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 C4orf17Q53FE4 359 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 SNAP47Q5SQN1 464 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 LRRC66Q68CR7 880 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 TCTN3Q6NUS6 607 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 TMCO3Q6UWJ1 677 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 LYSMD3Q7Z3D4 306 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 SLC9B2Q86UD5 537 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 PLXDC1Q8IUK5 500 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 AVL9Q8NBF6 648 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 NSMCE1Q8WV22 266 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 STARD8Q92502 1023 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 KCNK17Q96T54 332 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 AGAP2Q99490 1192 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 HERPUD2Q9BSE4 406 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 REPIN1Q9BWE0 567 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 TRIM7Q9C029 511 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 STN1Q9H668 368 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 UCK1Q9HA47 277 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 ETNK2Q9NVF9 386 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 SIDT1Q9NXL6 827 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 CD84Q9UIB8 345 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 DNPEPQ9ULA0 475 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 PCDHB3Q9Y5E6 796 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 RPS6KL1Q9Y6S9 549 aa9.76□□□□□ -0.85
TRAFD1-207ENST00000550051 A0A0U1RQS6 177 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 RGSL1A5PLK6 1076 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 MKRN2OSH3BPM6 223 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 TOX3O15405 576 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 ASMTLO95671 621 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 C9P02748 559 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 F3P13726 295 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 F8A1P23610 371 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 IL1R2P27930 398 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 ARL4AP40617 200 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 CLCNKAP51800 687 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 RPL26P61254 145 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 NFATC2Q13469 925 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 IHHQ14623 411 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 IL11RAQ14626 422 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 ALG1LQ6GMV1 187 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 C16orf46Q6P387 395 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 MARK2Q7KZI7 788 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 CHST15Q7LFX5 561 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 APTXQ7Z2E3 356 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 TRIM74Q86UV6 250 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 ATCAYQ86WG3 371 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 TEX19Q8NA77 164 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 ANKRD20A12PQ8NF67 263 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 FATE1Q969F0 183 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 CSPG4P5Q96PW8 444 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 WDR24Q96S15 920 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 LYSMD1Q96S90 227 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 RIOK2Q9BVS4 552 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 LRRC4CQ9HCJ2 640 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 MRPL47Q9HD33 250 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 CPNE7Q9UBL6 633 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 AMACRQ9UHK6 382 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 RPL26L1Q9UNX3 145 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 TP53TG5Q9Y2B4 290 aa9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 PCYT1BQ9Y5K3 369 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-207ENST00000550051 BLACEA4D250 179 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 GOLGA6L3A6NEY3 463 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 LILRA5A6NI73 299 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 TMCO5BA8MYB1 307 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 INPP4BO15327 924 aa9.74□□□□□ -0.85
TRAFD1-207ENST00000550051 MTSS1O43312 755 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms