RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 DUSP23Q9BVJ7 150 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 C1QTNF7Q9BXJ2 289 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 NRSN2Q9GZP1 204 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
TMEM116-208ENST00000549537 TSPY26PQ9H489 355 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 AKTIPQ9H8T0 292 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 USP29Q9HBJ7 922 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 CASS4Q9NQ75 786 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 ABHD10Q9NUJ1 306 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 ZFATQ9P243 1243 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 APOBEC3BQ9UH17 382 aaKnown RBP6.66□□□□□ -1.34
TMEM116-208ENST00000549537 SALL4Q9UJQ4 1053 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 RAXQ9Y2V3 346 aa6.66□□□□□ -1.34
TMEM116-208ENST00000549537 EME2A4GXA9 379 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 TMEM202A6NGA9 273 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 NPIPB15A6NHN6 443 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 C3orf70A6NLC5 250 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 TMEM110-MUSTN1A8MSY1 372 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 CASC3O15234 703 aaKnown RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 YY2O15391 372 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 CBFA2T2O43439 604 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 MFAP3LO75121 409 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 RECQL5O94762 991 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 MTA2O94776 668 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 MT-CO3P00414 261 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 HOXC4P09017 264 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 H2AFZP0C0S5 128 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 TSHRP16473 764 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 FSTP19883 344 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 LHCGRP22888 699 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 XPAP23025 273 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 SOX18P35713 384 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 GARSP41250 739 aaKnown RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 MMP13P45452 471 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 HK3P52790 923 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 ADKP55263 362 aaKnown RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 KIAA1024LP59773 190 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 MAXP61244 160 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 POLR2LP62875 67 aaKnown RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 SLC10A2Q12908 348 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 C1orf61Q13536 156 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 KRT81Q14533 505 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 ZNF235Q14590 738 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 PDK2Q15119 407 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 PTPRRQ15256 657 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 CNGA3Q16281 694 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 HADHQ16836 314 aaKnown RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 ANKRD20A8PQ5CZ79 823 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 RALGPS1Q5JS13 557 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 CFAP58Q5T655 872 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 C10orf62Q5T681 223 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 MARC1Q5VT66 337 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 ESRP1Q6NXG1 681 aaKnown RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 GUSBP11Q6P575 273 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 H2AFVQ71UI9 128 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 SLC35F3Q8IY50 421 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 IFI44Q8TCB0 444 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 LMX1AQ8TE12 382 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 PIH1D2Q8WWB5 315 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 CTNNBL1Q8WYA6 563 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 TSACCQ96A04 125 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 NXPE2Q96DL1 559 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 PDXPQ96GD0 296 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 TSGA13Q96PP4 275 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 MCCC1Q96RQ3 725 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-208ENST00000549537 FGF22Q9HCT0 170 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 CTTNBP2NLQ9P2B4 639 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 SPASTQ9UBP0 616 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 B4GALT6Q9UBX8 382 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 CLCA2Q9UQC9 943 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 PPIL1Q9Y3C6 166 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 OR1A2Q9Y585 309 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 DGKBQ9Y6T7 804 aa6.65□□□□□ -1.34
TMEM116-208ENST00000549537 A0A087WV48 116 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 A0A1W2PNU3 283 aaPredicted RBP6.64□□□□□ -1.35
TMEM116-208ENST00000549537 A0A1W2PQ67 120 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 A8MX80 341 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 ZNF487B1APH4 448 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 TNFRSF10CO14798 259 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 MATN3O15232 486 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 TLX3O43711 291 aaPredicted RBP6.64□□□□□ -1.35
TMEM116-208ENST00000549537 HEXIM1O94992 359 aaKnown RBP6.64□□□□□ -1.35
TMEM116-208ENST00000549537 RASGRP1O95267 797 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 PGLSO95336 258 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 SOD1P00441 154 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 CPP00450 1065 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 PRLP01236 227 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 PCCBP05166 539 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 PDHA1P08559 390 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 KRT7P08729 469 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 ELFN1P0C7U0 828 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 EDN3P14138 238 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 TGM2P21980 687 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 KDELR1P24390 212 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 CCNCP24863 283 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 VIPR1P32241 457 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 DUSP3P51452 185 aaPredicted RBP6.64□□□□□ -1.35
TMEM116-208ENST00000549537 PDX1P52945 283 aa6.64□□□□□ -1.35
TMEM116-208ENST00000549537 SRP54P61011 504 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms