RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CCNYQ8ND76 341 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 OR4D9Q8NGE8 314 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 MED8Q96G25 268 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 ZNF830Q96NB3 372 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 AKAP7Q9P0M2 348 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 TMEM9Q9P0T7 183 aa17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 TLN1Q9Y490 2541 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-205ENST00000548650 SPTA1P02549 2419 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 ASMTLO95671 621 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 JCHAINP01591 159 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 TPM3P06753 285 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 WT1P19544 449 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 TRA2AQ13595 282 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 TRIM14Q14142 442 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 MESDQ14696 234 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 ZFYVE27Q5T4F4 411 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 LYSMD3Q7Z3D4 306 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 VSIG1Q86XK7 387 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 ZNF761Q86XN6 746 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 SGF29Q96ES7 293 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 OLFM3Q96PB7 478 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 TRIB3Q96RU7 358 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 DEF6Q9H4E7 631 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 KCNK4Q9NYG8 393 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 SEPT10Q9P0V9 454 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 PRKAB1Q9Y478 270 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 PCDHGA4Q9Y5G9 962 aa17.25■□□□□ 0.35
CHMP1A-205ENST00000548650 SETXQ7Z333 2677 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 ASH1LQ9NR48 2969 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 A6NCN8 305 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 ANKRD66B4E2M5 251 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 MTA2O94776 668 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 ZIC2O95409 532 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 FGF3P11487 239 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 GPLD1P80108 840 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 GALNT3Q14435 633 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 MANEAQ5SRI9 462 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 FAM182AQ5T1J6 154 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 OR8K1Q8NGG5 319 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 SLC35G2Q8TBE7 412 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 EID2BQ96D98 161 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 DPYSL5Q9BPU6 564 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 MLPHQ9BV36 600 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 CEP41Q9BYV8 373 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 BRD8Q9H0E9 1235 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 FAM83DQ9H4H8 585 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 ABHD10Q9NUJ1 306 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 PKD2L2Q9NZM6 624 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 PCDHGA3Q9Y5H0 932 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 HEY1Q9Y5J3 304 aa17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 FLNBO75369 2602 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 ZNF106Q9H2Y7 1883 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-205ENST00000548650 RGSL1A5PLK6 1076 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 AKR1B10O60218 316 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 KRT1P04264 644 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 ACP5P13686 325 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 MPSTP25325 297 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 LINC00303Q3SY05 128 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 TMEM164Q5U3C3 297 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 CHST15Q7LFX5 561 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 AGBL5Q8NDL9 886 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 IMP4Q96G21 291 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 ADGRE3Q9BY15 652 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 RMI1Q9H9A7 625 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 SPTLC3Q9NUV7 552 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 TBC1D29Q9UFV1 150 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 ZNHIT2Q9UHR6 403 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 KCNK6Q9Y257 313 aa17.23■□□□□ 0.35
CHMP1A-205ENST00000548650 TRBV23OR9-2A0A075B6M9 112 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 STMND1H3BQB6 276 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 APOL1O14791 398 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 DUX1O43812 170 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 MFAP3LO75121 409 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 ITGB2P05107 769 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 DCDC1P59894 354 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 HHEXQ03014 270 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 NPNTQ6UXI9 565 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 VSTM4Q8IW00 320 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 EXD3Q8N9H8 876 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 CCHCR1Q8TD31 782 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 ART4Q93070 314 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 TADA1Q96BN2 335 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 TAAR9Q96RI9 348 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 SLC38A3Q99624 504 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 CHP1Q99653 195 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 HERPUD2Q9BSE4 406 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 DDA1Q9BW61 102 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 ZMYND15Q9H091 742 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 SARS2Q9NP81 518 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 PDP2Q9P2J9 529 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 NFKBIL1Q9UBC1 381 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 PCDHB11Q9Y5F2 797 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 ADGRG1Q9Y653 693 aa17.22■□□□□ 0.35
CHMP1A-205ENST00000548650 MYO18BQ8IUG5 2567 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 B8ZZF3 427 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 CBFA2T2O43439 604 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 NUAK1O60285 661 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 PIRTP0C851 137 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms