RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 FASNP49327 2511 aaKnown RBP4.46□□□□□ -1.69
CBX5-203ENST00000547872 SHROOM3Q8TF72 1996 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 MYO16Q9Y6X6 1858 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 TRABD2BA6NFA1 517 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 CGB1A6NKQ9 187 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 PLK4O00444 970 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 DSCR3O14972 297 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 PIP5K1BO14986 540 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 CHADO15335 359 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 ATG13O75143 517 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 B3GAT3O94766 335 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 PAPSS2O95340 614 aaPredicted RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 PRAMEF12O95522 483 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 CELA2AP08217 269 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 OR4Q2P0C623 313 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 ARSAP15289 507 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 SERPINB3P29508 390 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 HTR3AP46098 478 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 CLCNKBP51801 687 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 ALDH18A1P54886 795 aaKnown RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 RAE1P78406 368 aaKnown RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 SETQ01105 290 aaPredicted RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 GFPT1Q06210 699 aaPredicted RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 CCDC173Q0VFZ6 552 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 PLD1Q13393 1074 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 PFKFB3Q16875 520 aaPredicted RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 COLEC12Q5KU26 742 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 LRCH2Q5VUJ6 765 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 LYSMD4Q5XG99 296 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 FAM90A2PQ658T7 463 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 CCDC144NLQ6NUI1 221 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 NOTUMQ6P988 496 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 CASC1Q6TDU7 716 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 CCNI2Q6ZMN8 369 aaPredicted RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 ZNF813Q6ZN06 617 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 LPCAT2Q7L5N7 544 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 YTHDF3Q7Z739 585 aaKnown RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 SKAP1Q86WV1 359 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 RALGPS2Q86X27 583 aaPredicted RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 ARID3BQ8IVW6 561 aaPredicted RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 NAXDQ8IW45 347 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 OSR1Q8TAX0 266 aaPredicted RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 HMGB4Q8WW32 186 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 PSPC1Q8WXF1 523 aaKnown RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 OVCA2Q8WZ82 227 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 VOPP1Q96AW1 172 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 CEP170P1Q96L14 293 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 LRRC3BQ96PB8 259 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 PRPF18Q99633 342 aaKnown RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 FAM118BQ9BPY3 351 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 TTLL2Q9BWV7 592 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 TEKT3Q9BXF9 490 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 SPZ1Q9BXG8 430 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 IL25Q9H293 177 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 DCTPP1Q9H773 170 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 UBN1Q9NPG3 1134 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 ARL8BQ9NVJ2 186 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 MTRRQ9UBK8 725 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 DTNAQ9Y4J8 743 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 KIAA1549LQ6ZVL6 1849 aa4.46□□□□□ -1.7
CBX5-203ENST00000547872 ANKRD11Q6UB99 2663 aaPredicted RBP4.46□□□□□ -1.7
CBX5-203ENST00000547872 NUP210Q8TEM1 1887 aaPredicted RBP4.45□□□□□ -1.7
CBX5-203ENST00000547872 ITPR1Q14643 2758 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 PLXNB3Q9ULL4 1909 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 TNRC6BQ9UPQ9 1833 aaKnown RBP4.45□□□□□ -1.7
CBX5-203ENST00000547872 IGLV3-22A0A075B6J6 115 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 TTC34A8MYJ7 566 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 FFAR2O15552 330 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 MOSPD3O75425 235 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 AKAP3O75969 853 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 PRR35P0CG20 571 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 ARF4P18085 180 aaPredicted RBP4.45□□□□□ -1.7
CBX5-203ENST00000547872 MATN1P21941 496 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 GABRR2P28476 465 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 HOXA11P31270 313 aaPredicted RBP4.45□□□□□ -1.7
CBX5-203ENST00000547872 ARHGAP25P42331 645 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 OSTNP61366 133 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 NCBP1Q09161 790 aaKnown RBP4.45□□□□□ -1.7
CBX5-203ENST00000547872 LAMTOR4Q0VGL1 99 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 SLC14A1Q13336 389 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 CBFBQ13951 182 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 EMC2Q15006 297 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 CNGA3Q16281 694 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 ITPRIPL2Q3MIP1 535 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 CTXN3Q4LDR2 81 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 HIST2H2BCQ6DN03 193 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 SLC18B1Q6NT16 456 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 PGBD2Q6P3X8 592 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 C1orf228Q6PIY5 440 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 MRPL10Q7Z7H8 261 aaKnown RBP4.45□□□□□ -1.7
CBX5-203ENST00000547872 NEK8Q86SG6 692 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 PIP4P1Q86T03 277 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 GATAD2AQ86YP4 633 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 GALNT16Q8N428 558 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 CNNM3Q8NE01 707 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 NCOA7Q8NI08 942 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 PRPF31Q8WWY3 499 aaKnown RBP4.45□□□□□ -1.7
CBX5-203ENST00000547872 RSPH1Q8WYR4 309 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 MSANTD3Q96H12 275 aa4.45□□□□□ -1.7
CBX5-203ENST00000547872 CCDC43Q96MW1 224 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms