RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PTCD2Q8WV60 388 aaKnown RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 LPGAT1Q92604 370 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 WRAP53Q9BUR4 548 aaKnown RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 CADM1Q9BY67 442 aaKnown RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 DUS2Q9NX74 493 aaKnown RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 ARHGAP26Q9UNA1 814 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 GYG2O15488 501 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 RASSF9O75901 435 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 CRABP2P29373 138 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 PIK3CGP48736 1102 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 TUBB3Q13509 450 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 GRIN2CQ14957 1233 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 INSCQ1MX18 579 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 TCHHL1Q5QJ38 904 aaPredicted RBP11.89□□□□□ -0.51
CCDC38-202ENST00000546386 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 ASRGL1Q7L266 308 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 RBM15BQ8NDT2 890 aaKnown RBP11.89□□□□□ -0.51
CCDC38-202ENST00000546386 FGF13Q92913 245 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 ISL2Q96A47 359 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 ILKAPQ9H0C8 392 aaPredicted RBP11.89□□□□□ -0.51
CCDC38-202ENST00000546386 ACTR5Q9H9F9 607 aaPredicted RBP11.89□□□□□ -0.51
CCDC38-202ENST00000546386 MRM3Q9HC36 420 aaKnown RBP11.89□□□□□ -0.51
CCDC38-202ENST00000546386 IL17CQ9P0M4 197 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 SARDHQ9UL12 918 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 PDE5AO76074 875 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 EPOP01588 193 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 CTSLP07711 333 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 CD1DP15813 335 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 DLX2Q07687 328 aaPredicted RBP11.89□□□□□ -0.51
CCDC38-202ENST00000546386 DHCR24Q15392 516 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 MYLK3Q32MK0 819 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 LSM12Q3MHD2 195 aaKnown RBP11.89□□□□□ -0.51
CCDC38-202ENST00000546386 INO80DQ53TQ3 878 aaPredicted RBP11.89□□□□□ -0.51
CCDC38-202ENST00000546386 AGAP9Q5VTM2 703 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 PPP2R2DQ66LE6 453 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 ALG1LQ6GMV1 187 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 C22orf39Q6P5X5 142 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 CRTC1Q6UUV9 634 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 PELI3Q8N2H9 469 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 DTX3LQ8TDB6 740 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 LINGO1Q96FE5 620 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 UBXN10Q96LJ8 280 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 FAM161BQ96MY7 647 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 ACOX2Q99424 681 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 THTPAQ9BU02 230 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 CDH19Q9H159 772 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 KCNK4Q9NYG8 393 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 IRAK3Q9Y616 596 aa11.89□□□□□ -0.51
CCDC38-202ENST00000546386 A0A0J9YYE9 177 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 PRR23AA6NEV1 266 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 GAPDHSO14556 408 aaPredicted RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 GRID2O43424 1007 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 KATNA1O75449 491 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 TRBC1P01850 177 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 ETV3P41162 512 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 CSRP3P50461 194 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 CLCN5P51795 746 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 XIAPP98170 497 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 PFKPQ01813 784 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 PTSQ03393 145 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 ATP13A5Q4VNC0 1218 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 ARHGAP15Q53QZ3 475 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 Q6ZVL8 140 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 TRIM74Q86UV6 250 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 TRIM42Q8IWZ5 723 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 OR2A12Q8NGT7 310 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 WDR60Q8WVS4 1066 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 NSL1Q96IY1 281 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 RANBP9Q96S59 729 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 MRPL57Q9BQC6 102 aaKnown RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 TRIM8Q9BZR9 551 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 WWP1Q9H0M0 922 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 SAR1AQ9NR31 198 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 NSMCE4AQ9NXX6 385 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 OR2AG2A6NM03 316 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 KPNA3O00505 521 aaPredicted RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 SCAMP1O15126 338 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 INPP4BO15327 924 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 FZD6O60353 706 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 IPO13O94829 963 aaKnown RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 PAPSS2O95340 614 aaPredicted RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 GSTA1P08263 222 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 RPL14P50914 215 aaKnown RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 SH3BP2P78314 561 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 DBN1Q16643 649 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 TANGO2Q6ICL3 276 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 MYLK4Q86YV6 388 aaPredicted RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 OR9I1Q8NGQ6 314 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 C3orf30Q96M34 536 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 KXD1Q9BQD3 176 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 AARSD1Q9BTE6 412 aaKnown RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 ATP13A3Q9H7F0 1226 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 ARHGEF3Q9NR81 526 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 B4GALT6Q9UBX8 382 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 NKX1-2Q9UD57 310 aaPredicted RBP11.88□□□□□ -0.51
CCDC38-202ENST00000546386 RNF112Q9ULX5 631 aa11.88□□□□□ -0.51
CCDC38-202ENST00000546386 AIM2O14862 343 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms