RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 RIOK2Q9BVS4 552 aaKnown RBP16.52■□□□□ 0.24
CPSF7-225ENST00000545934 ZMYND15Q9H091 742 aa16.52■□□□□ 0.24
CPSF7-225ENST00000545934 CNOT8Q9UFF9 292 aaKnown RBP16.52■□□□□ 0.24
CPSF7-225ENST00000545934 PLAAQ9Y263 795 aa16.52■□□□□ 0.24
CPSF7-225ENST00000545934 KCNMB2Q9Y691 235 aa16.52■□□□□ 0.24
CPSF7-225ENST00000545934 OAS3Q9Y6K5 1087 aaKnown RBP16.52■□□□□ 0.24
CPSF7-225ENST00000545934 PRR19A6NJB7 356 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 INPP4BO15327 924 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 TCN2P20062 427 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 F8A1P23610 371 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 ARL4AP40617 200 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 KLRB1Q12918 225 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 NFATC2Q13469 925 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 SMTNL2Q2TAL5 461 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 BOLA3Q53S33 107 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 CHST15Q7LFX5 561 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-225ENST00000545934 LYSMD3Q7Z3D4 306 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 NDUFAF2Q8N183 169 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 ESX1Q8N693 406 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 ANKRD20A12PQ8NF67 263 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 NSMCE1Q8WV22 266 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 LYSMD1Q96S90 227 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 EPB41L1Q9H4G0 881 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 RMI1Q9H9A7 625 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 NT5MQ9NPB1 228 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.51■□□□□ 0.23
CPSF7-225ENST00000545934 CHMP5Q9NZZ3 219 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 PRKAB1Q9Y478 270 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 SCINQ9Y6U3 715 aa16.51■□□□□ 0.23
CPSF7-225ENST00000545934 USP9XQ93008 2570 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-225ENST00000545934 POLR1CO15160 346 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 PRLP01236 227 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 C9P02748 559 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 FTLP02792 175 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 ATP1A1P05023 1023 aaKnown RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 RARAP10276 462 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 F3P13726 295 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 SERPINB6P35237 376 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 MYL5Q02045 173 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 HENMT1Q5T8I9 393 aaKnown RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 TXNRD3NBQ6F5E7 133 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 ZNF571Q7Z3V5 609 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 KDELC2Q7Z4H8 507 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 SLC9B2Q86UD5 537 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 MAML1Q92585 1016 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 HERPUD2Q9BSE4 406 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 TBC1D10AQ9BXI6 508 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 TDRD1Q9BXT4 1180 aaKnown RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 POLR1EQ9GZS1 481 aaKnown RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 STN1Q9H668 368 aaKnown RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 PCDH18Q9HCL0 1135 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 OGFRQ9NZT2 677 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 ZNHIT2Q9UHR6 403 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 DNPEPQ9ULA0 475 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 TP53TG5Q9Y2B4 290 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 KCTD3Q9Y597 815 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 ADGRG1Q9Y653 693 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 MRPS18BQ9Y676 258 aaKnown RBP16.5■□□□□ 0.23
CPSF7-225ENST00000545934 RPS6KL1Q9Y6S9 549 aa16.5■□□□□ 0.23
CPSF7-225ENST00000545934 TEX15Q9BXT5 2789 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 KIR2DS5A0A0G2JLQ3 304 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 A0A0G2JNG1 304 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 LILRA5A6NI73 299 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 LRRC53A6NM62 1247 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 FADS2P1A8MWK0 482 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 K7EM74 188 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 KIR2DS3K7RE56 304 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 DDX3XO00571 662 aaKnown RBP eCLIP16.49■□□□□ 0.232e-6■■■■□ 20.6
CPSF7-225ENST00000545934 ASMTLO95671 621 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 SLC2A4P14672 509 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 ZNF28P17035 718 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 IL4RP24394 825 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 PRKCIP41743 596 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 CLCNKAP51800 687 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 UBE2IP63279 158 aaKnown RBP16.49■□□□□ 0.23
CPSF7-225ENST00000545934 SEPT6Q14141 434 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 KIR2DS5Q14953 304 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 E4F1Q66K89 784 aaPredicted RBP16.49■□□□□ 0.23
CPSF7-225ENST00000545934 C16orf46Q6P387 395 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 LRRC49Q8IUZ0 686 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 FAM71BQ8TC56 605 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 TEKT4Q8WW24 435 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 HSPH1Q92598 858 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 ZNF653Q96CK0 615 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 HAUS4Q9H6D7 363 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 UCK1Q9HA47 277 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 CPNE7Q9UBL6 633 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 KCNK6Q9Y257 313 aa16.49■□□□□ 0.23
CPSF7-225ENST00000545934 SHANK1Q9Y566 2161 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 OR5K4A6NMS3 321 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 NUAK1O60285 661 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 CLDN7O95471 211 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 FURINP09958 794 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 ACP5P13686 325 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 SPINT3P49223 89 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 GFERP55789 205 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 DSC2Q02487 901 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 SLC25A11Q02978 314 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms