RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 APOPT1Q96IL0 206 aa13.7□□□□□ -0.22
SCARB1-209ENST00000545305 COQ10AQ96MF6 247 aa13.7□□□□□ -0.22
SCARB1-209ENST00000545305 TSNARE1Q96NA8 513 aa13.7□□□□□ -0.22
SCARB1-209ENST00000545305 ZSCAN5AQ9BUG6 496 aa13.7□□□□□ -0.22
SCARB1-209ENST00000545305 SNX15Q9NRS6 342 aa13.7□□□□□ -0.22
SCARB1-209ENST00000545305 KCTD5Q9NXV2 234 aa13.7□□□□□ -0.22
SCARB1-209ENST00000545305 CD84Q9UIB8 345 aa13.7□□□□□ -0.22
SCARB1-209ENST00000545305 CRYL1Q9Y2S2 319 aa13.7□□□□□ -0.22
SCARB1-209ENST00000545305 TRBV5-4A0A0C4DH59 114 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 TMEM120BA0PK00 339 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 FAM47DPA6NHR8 397 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 FAM170BA6NMN3 283 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 CHURC1-FNTBB4DL54 471 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 PRPF4O43172 522 aaKnown RBP eCLIP13.69□□□□□ -0.222e-8■■□□□ 13.1
SCARB1-209ENST00000545305 MMP20O60882 483 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 RFPL1O75677 317 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 ALDOAP04075 364 aaKnown RBP13.69□□□□□ -0.22
SCARB1-209ENST00000545305 ZNF7P17097 686 aaPredicted RBP13.69□□□□□ -0.22
SCARB1-209ENST00000545305 ACRV1P26436 265 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 CRABP2P29373 138 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 CDKN1CP49918 316 aaPredicted RBP13.69□□□□□ -0.22
SCARB1-209ENST00000545305 ATP1A2P50993 1020 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 DGKEP52429 567 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 SLC18A2Q05940 514 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 ITIH4Q14624 930 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 SEPT7Q16181 437 aaKnown RBP13.69□□□□□ -0.22
SCARB1-209ENST00000545305 DBN1Q16643 649 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 ZNF789Q5FWF6 425 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 HECTD2Q5U5R9 776 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 TMEM92Q6UXU6 159 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 RFLNAQ6ZTI6 216 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 USP30Q70CQ3 517 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 TECPR1Q7Z6L1 1165 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 RBFAQ8N0V3 343 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 NXPE1Q8N323 547 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 ANKRD42Q8N9B4 389 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 AP2M1Q96CW1 435 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 ASB2Q96Q27 587 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 NDNQ99608 321 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 RIOK2Q9BVS4 552 aaKnown RBP13.69□□□□□ -0.22
SCARB1-209ENST00000545305 CLPBQ9H078 707 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 SLC6A17Q9H1V8 727 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 ABCG8Q9H221 673 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 VPS11Q9H270 941 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 CD248Q9HCU0 757 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 MKS1Q9NXB0 559 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 SERGEFQ9UGK8 458 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 TLK1Q9UKI8 766 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 FZD4Q9ULV1 537 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 PCDHB1Q9Y5F3 818 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 COMMD10Q9Y6G5 202 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 PLXNA2O75051 1894 aa13.69□□□□□ -0.22
SCARB1-209ENST00000545305 STK25O00506 426 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 PRMT5O14744 637 aaPredicted RBP13.68□□□□□ -0.22
SCARB1-209ENST00000545305 GPR39O43194 453 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 PLRG1O43660 514 aaKnown RBP13.68□□□□□ -0.22
SCARB1-209ENST00000545305 GLRA3O75311 464 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 RECQL5O94762 991 aaPredicted RBP13.68□□□□□ -0.22
SCARB1-209ENST00000545305 ZWINTO95229 277 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 ESR1P03372 595 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 CREB1P16220 341 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 UGT1A6P19224 532 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 NDUFV2P19404 249 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 UGT1A1P22309 533 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 UGT1A4P22310 534 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 UGT1A3P35503 534 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 UGT1A5P35504 534 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 MAGEA12P43365 314 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 CCT5P48643 541 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 RAB10P61026 200 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 ATP13A5Q4VNC0 1218 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 SETMARQ53H47 684 aaPredicted RBP13.68□□□□□ -0.22
SCARB1-209ENST00000545305 RBM20Q5T481 1227 aaKnown RBP13.68□□□□□ -0.22
SCARB1-209ENST00000545305 HENMT1Q5T8I9 393 aaKnown RBP13.68□□□□□ -0.22
SCARB1-209ENST00000545305 KIAA1161Q6NSJ0 714 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 SYT13Q7L8C5 426 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 CCDC91Q7Z6B0 441 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 CMC1Q7Z7K0 106 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 GJD3Q8N144 294 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 ZNF687Q8N1G0 1237 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 PGBD3Q8N328 593 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 BANPQ8N9N5 519 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 FLCNQ8NFG4 579 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 OR14C36Q8NHC7 312 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 GDAP1Q8TB36 358 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 HMGB4Q8WW32 186 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 SCAMP4Q969E2 229 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 MRGPRX1Q96LB2 322 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 COPS8Q99627 209 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 AARSD1Q9BTE6 412 aaKnown RBP13.68□□□□□ -0.22
SCARB1-209ENST00000545305 SLC13A1Q9BZW2 595 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 FOXQ1Q9C009 403 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 CAB39LQ9H9S4 337 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 TBC1D17Q9HA65 648 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 PREBQ9HCU5 417 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 SMOXQ9NWM0 555 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 ZDHHC3Q9NYG2 299 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 GNPTGQ9UJJ9 305 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 ANKRD6Q9Y2G4 727 aa13.68□□□□□ -0.22
SCARB1-209ENST00000545305 COQ6Q9Y2Z9 468 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms