RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 LRTOMTQ8WZ04 291 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ABHD8Q96I13 439 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 DNAJC1Q96KC8 554 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 DEPDC7Q96QD5 511 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TTPALQ9BTX7 342 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TRIM8Q9BZR9 551 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CLEC4MQ9H2X3 399 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 TFB2MQ9H5Q4 396 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 NOL11Q9H8H0 719 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 ZBTB26Q9HCK0 441 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 C8orf4Q9NR00 106 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 MRPL17Q9NRX2 175 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 TMEM248Q9NWD8 314 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 POLR3HQ9Y535 204 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 SLC38A8A6NNN8 435 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 PIP5K1BO14986 540 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 INSIG1O15503 277 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 TIPRLO75663 272 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ZNF682O95780 498 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 AMHP03971 560 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 PCNAP12004 261 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 SERPINA4P29622 427 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 MAPK8P45983 427 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 MCCD1P59942 119 aaPredicted RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 LCP2Q13094 533 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 KLHL12Q53G59 568 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ABRAXAS1Q6UWZ7 409 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ALKAL1Q6UXT8 129 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 CDYL2Q8N8U2 506 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ATAD1Q8NBU5 361 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 OR4K2Q8NGD2 314 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 LPGAT1Q92604 370 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 BORCS5Q969J3 196 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 MTERF3Q96E29 417 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 MAGEH1Q9H213 219 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ASB8Q9H765 288 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 CLK4Q9HAZ1 481 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 LIMD1Q9UGP4 676 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 CNOT6Q9ULM6 557 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 INVSQ9Y283 1065 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 RAI2Q9Y5P3 530 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 C5orf58C9J3I9 102 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 PEX1O43933 1283 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 SNAP91O60641 907 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 PQBP1O60828 265 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 UROSP10746 265 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 CDH3P22223 829 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 CORO1AP31146 461 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 SOAT1P35610 550 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 GNA12Q03113 381 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 DUSP4Q13115 394 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 SPDYE7PQ495Y7 208 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 KCTD21Q4G0X4 260 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 UBXN11Q5T124 520 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 MFSD4BQ5TF39 518 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 SZRD1Q7Z422 152 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 HEATR4Q86WZ0 1026 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 IFNL1Q8IU54 200 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 SPPL2CQ8IUH8 684 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 SIDT2Q8NBJ9 832 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 MZB1Q8WU39 189 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ASB9Q96DX5 294 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ZNF599Q96NL3 588 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 GPR21Q99679 349 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 NOL6Q9H6R4 1146 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 PIDD1Q9HB75 910 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 TRMT13Q9NUP7 481 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 LMCD1Q9NZU5 365 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 MAGEL2Q9UJ55 1249 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 RWDD3Q9Y3V2 267 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 PCDHB1Q9Y5F3 818 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 UBXN8O00124 270 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 MFN2O95140 757 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ZNF865P0CJ78 1059 aaPredicted RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 CTPS1P17812 591 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ATP6V1E1P36543 226 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 GPR15P49685 360 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 ARPC4P59998 168 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 RPL38P63173 70 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 TAB1Q15750 504 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 SLC5A9Q2M3M2 681 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 VPS26BQ4G0F5 336 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 LIN52Q52LA3 116 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 TRIM74Q86UV6 250 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 TRIM73Q86UV7 250 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 EGFL6Q8IUX8 553 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 TAGAPQ8N103 731 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 CPSF7Q8N684 471 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 TOP1MTQ969P6 601 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 SLC47A1Q96FL8 570 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 PGAP3Q96FM1 320 aaPredicted RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 MAGEB10Q96LZ2 347 aaPredicted RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 RANBP9Q96S59 729 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 NUSAP1Q9BXS6 441 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 HMX1Q9NP08 348 aaPredicted RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 EXOSC4Q9NPD3 245 aaKnown RBP5.76□□□□□ -1.49
VPS50-220ENST00000544910 KLHL20Q9Y2M5 609 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 TMEM233B4DJY2 109 aa5.76□□□□□ -1.49
VPS50-220ENST00000544910 MATN2O00339 956 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms