RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 TTC23Q5W5X9 447 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 ARHGAP17Q68EM7 881 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 CCBE1Q6UXH8 406 aaPredicted RBP12.62□□□□□ -0.39
SMG8-202ENST00000543872 P2RY8Q86VZ1 359 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 DCP2Q8IU60 420 aaKnown RBP12.62□□□□□ -0.39
SMG8-202ENST00000543872 MINDY1Q8N5J2 469 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 CELF2-AS1Q8N7Q2 184 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 ASCC1Q8N9N2 400 aaKnown RBP12.62□□□□□ -0.39
SMG8-202ENST00000543872 RHOXF1Q8NHV9 184 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 CNIH3Q8TBE1 160 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 NSMCE2Q96MF7 247 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 DEPDC7Q96QD5 511 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 GAD1Q99259 594 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 MLPHQ9BV36 600 aaPredicted RBP12.62□□□□□ -0.39
SMG8-202ENST00000543872 CASS4Q9NQ75 786 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 FAM118AQ9NWS6 357 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 ERVK-18Q9QC07 812 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 ABCD2Q9UBJ2 740 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 MRPL42Q9Y6G3 142 aaKnown RBP12.62□□□□□ -0.39
SMG8-202ENST00000543872 A0A087WZ62 844 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 VWA5AO00534 786 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 HCRTO43612 131 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 B4GALT4O60513 344 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 JCHAINP01591 159 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 CHRNA1P02708 482 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 HGFP14210 728 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 MTHFRP42898 656 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 SULT1E1P49888 294 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 IL5RAQ01344 420 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 TNFAIP2Q03169 654 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 GRM1Q13255 1194 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 PSMD5Q16401 504 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 IRAK1BP1Q5VVH5 260 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 ZNF470Q6ECI4 717 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 TWF2Q6IBS0 349 aaKnown RBP12.62□□□□□ -0.39
SMG8-202ENST00000543872 CYHR1Q6ZMK1 362 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 RBM23Q86U06 439 aaKnown RBP12.62□□□□□ -0.39
SMG8-202ENST00000543872 NGLY1Q96IV0 654 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 CITED4Q96RK1 184 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 ALG9Q9H6U8 611 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 C8orf4Q9NR00 106 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 FKBP14Q9NWM8 211 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 PAK1IP1Q9NWT1 392 aaPredicted RBP12.62□□□□□ -0.39
SMG8-202ENST00000543872 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 PDZK1P1A8MUH7 402 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 SLC22A1O15245 554 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 HS6ST1O60243 411 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 PLA2G6O60733 806 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 ZNF135P52742 658 aaPredicted RBP12.61□□□□□ -0.39
SMG8-202ENST00000543872 DIO3P55073 304 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 OR4D2P58180 307 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 LAMTOR4Q0VGL1 99 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 KCNAB2Q13303 367 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 CDONQ4KMG0 1287 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 FBXO48Q5FWF7 155 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 NOL9Q5SY16 702 aaKnown RBP12.61□□□□□ -0.39
SMG8-202ENST00000543872 GLYATQ6IB77 296 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 SPESP1Q6UW49 350 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 MPZL3Q6UWV2 235 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 MICU2Q8IYU8 434 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 LEMD2Q8NC56 503 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 MCOLN3Q8TDD5 553 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMG8-202ENST00000543872 TMEM125Q96AQ2 219 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 KCNA7Q96RP8 456 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 FEM1AQ9BSK4 669 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 ATXN3LQ9H3M9 355 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 SMOC2Q9H3U7 446 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 NTN4Q9HB63 628 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 SLC2A6Q9UGQ3 507 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 INVSQ9Y283 1065 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 TCRBV5S2A0A599 114 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 MAGEB16A2A368 324 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 RGS13O14921 159 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 UPK1BO75841 260 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 ALPLP05186 524 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 ASNSP08243 561 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 FMO3P31513 532 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 GLUD2P49448 558 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 EFNA5P52803 228 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 TXNDC11Q6PKC3 985 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 SCIMPQ6UWF3 145 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 OTOP3Q7RTS5 596 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 PROX1Q92786 737 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 TMEM246Q9BRR3 403 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 IRF2BPLQ9H1B7 796 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 RNF19AQ9NV58 838 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 SETD4Q9NVD3 440 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 ZNF221Q9UK13 617 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 CENPBD1B2RD01 187 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 G3V2T6 193 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 H0Y626 953 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 EEF2KO00418 725 aaKnown RBP12.61□□□□□ -0.39
SMG8-202ENST00000543872 PIP5K1BO14986 540 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 TRIM16O95361 564 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 ITIH1P19827 911 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 EIF2DP41214 584 aaKnown RBP12.61□□□□□ -0.39
SMG8-202ENST00000543872 NPY2RP49146 381 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 PAGE3Q5JUK9 113 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 FKBP9P1Q75LS8 142 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms