RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 M0QZ92 97 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 TNFRSF10BO14763 440 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 CHEK2O96017 543 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 EPOP01588 193 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 CYBBP04839 570 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 HNRNPCP07910 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS33A-208ENST00000543633 ENO2P09104 434 aaPredicted RBP13.66□□□□□ -0.22
VPS33A-208ENST00000543633 STT3AP46977 705 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 SLC5A3P53794 718 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 CDH13P55290 713 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 TIAL1Q01085 375 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS33A-208ENST00000543633 TSPY1Q01534 308 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 CLCQ05315 142 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 CBX2Q14781 532 aaPredicted RBP13.66□□□□□ -0.22
VPS33A-208ENST00000543633 C16orf72Q14CZ0 275 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 CRY1Q16526 586 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 ANKS6Q68DC2 871 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 ZNF773Q6PK81 442 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 TXNDC11Q6PKC3 985 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 MRPL10Q7Z7H8 261 aaKnown RBP13.66□□□□□ -0.22
VPS33A-208ENST00000543633 OR52K2Q8NGK3 314 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 STAG3L4Q8TBR4 150 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 SLC39A13Q96H72 371 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 BDH2Q9BUT1 245 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 ZYG11BQ9C0D3 744 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 MUC3BQ9H195 1237 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 POLR1BQ9H9Y6 1135 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 IL1RL2Q9HB29 575 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 CACNG4Q9UBN1 327 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 SFMBT1Q9UHJ3 866 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 MAGEL2Q9UJ55 1249 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 SH3GLB1Q9Y371 365 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 Q9Y3F1 56 aa13.66□□□□□ -0.22
VPS33A-208ENST00000543633 IGLV3-10A0A075B6K4 115 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 MOXD2PA6NHM9 499 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 INPP4BO15327 924 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 CD3EAPO15446 510 aaKnown RBP13.65□□□□□ -0.22
VPS33A-208ENST00000543633 MSI1O43347 362 aaKnown RBP13.65□□□□□ -0.22
VPS33A-208ENST00000543633 ATE1O95260 518 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 MLYCDO95822 493 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 HPRP00739 348 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 INHBBP09529 407 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 TSPAN8P19075 237 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 UGT1A6P19224 532 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 CD97P48960 835 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 MRPS6P82932 125 aaKnown RBP13.65□□□□□ -0.22
VPS33A-208ENST00000543633 DSC2Q02487 901 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 LIPEQ05469 1076 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 IL10RBQ08334 325 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 PMS2P3Q13401 168 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 CAPRIN1Q14444 709 aaKnown RBP13.65□□□□□ -0.22
VPS33A-208ENST00000543633 KDELC2Q7Z4H8 507 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 SCD5Q86SK9 330 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 C14orf80Q86SX3 495 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 THEM5Q8N1Q8 247 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 FBXO39Q8N4B4 442 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 TMEM199Q8N511 208 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 NPLOC4Q8TAT6 608 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 ARRDC2Q8TBH0 407 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 TBC1D15Q8TC07 691 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 BPIFB1Q8TDL5 484 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 HMCESQ96FZ2 354 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 MAGED4Q96JG8 741 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 AGO3Q9H9G7 860 aaKnown RBP13.65□□□□□ -0.22
VPS33A-208ENST00000543633 TMLHEQ9NVH6 421 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 MIOSQ9NXC5 875 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 TRPV2Q9Y5S1 764 aa13.65□□□□□ -0.22
VPS33A-208ENST00000543633 FAM234BA2RU67 622 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 LCHNA4D1U4 455 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 FAM149AA5PLN7 773 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 MEIS3P2A8K0S8 358 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 KLK8O60259 260 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 PRSS23O95084 383 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 GOT2P00505 430 aaKnown RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 UROSP10746 265 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 CDH1P12830 882 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 TYMPP19971 482 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 ZFP36L2P47974 494 aaKnown RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 STC1P52823 247 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 FOXA1P55317 472 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 EMX2Q04743 252 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 MOGQ16653 247 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 PFKFB4Q16877 469 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 PIK3R6Q5UE93 754 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 KCTD8Q6ZWB6 473 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 CHCHD4Q8N4Q1 142 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 AADATQ8N5Z0 425 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 DPP10Q8N608 796 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 OR13F1Q8NGS4 319 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 SCAMP5Q8TAC9 235 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 FBXL20Q96IG2 436 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 UROC1Q96N76 676 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 ZNF599Q96NL3 588 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 SLC30A3Q99726 388 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 MAGEE1Q9HCI5 957 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 CATSPERZQ9NTU4 200 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms