RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PYROXD2Q8N2H3 581 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 EIF1ADQ8N9N8 165 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 SRFBP1Q8NEF9 429 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 PGM2Q96G03 612 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 RHOBTB2Q9BYZ6 727 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 GBA3Q9H227 469 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 TMEM216Q9P0N5 145 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 LIMD1Q9UGP4 676 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 COQ4Q9Y3A0 265 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 DCXO43602 365 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 IQCF3P0C7M6 154 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 HSPA13P48723 471 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 NUP107P57740 925 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 LPCAT2Q7L5N7 544 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 R3HCC1LQ7Z5L2 792 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ACTRT2Q8TDY3 377 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 KLK6Q92876 244 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 DTNBP1Q96EV8 351 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 TMEM245Q9H330 911 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ACSS3Q9H6R3 686 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 HPF1Q9NWY4 346 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ENOPH1Q9UHY7 261 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 PCDHGA4Q9Y5G9 962 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 WNT6Q9Y6F9 365 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 DUOX1Q9NRD9 1551 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 SLC28A1O00337 649 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 VAV1P15498 845 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 MAGEA8P43361 318 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 IFI35P80217 286 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 TBL3Q12788 808 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 STX4Q12846 297 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 TEAD2Q15562 447 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 CARD16Q5EG05 197 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 SPDYCQ5MJ68 293 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ATXN7L2Q5T6C5 722 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 CDCA2Q69YH5 1023 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 PDE12Q6L8Q7 609 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 SLC39A5Q6ZMH5 540 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 QKIQ96PU8 341 aaKnown RBP eCLIP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 HAPLN3Q96S86 360 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 NOL6Q9H6R4 1146 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ANKZF1Q9H8Y5 726 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ACTL7BQ9Y614 415 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 RCCD1A6NED2 376 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 H3BNH8 94 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 APOA1P02647 267 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 GALTP07902 379 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TPSB2P20231 275 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 PAICSP22234 425 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 KCNA5P22460 613 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 RPIAP49247 311 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 RFTN1Q14699 578 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TPSAB1Q15661 275 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 MINDY4Q4G0A6 757 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TBCELQ5QJ74 424 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TTC33Q6PID6 262 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TMPRSS11BQ86T26 416 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ADCK1Q86TW2 530 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 MMAAQ8IVH4 418 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 AHI1Q8N157 1196 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ZBTB2Q8N680 514 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ZSCAN18Q8TBC5 510 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 KCTD13Q8WZ19 329 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TBATAQ96M53 351 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TBCDQ9BTW9 1192 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 SPATA5L1Q9BVQ7 753 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 BCO2Q9BYV7 579 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 FBRSL1Q9HCM7 1045 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TMEM5Q9Y2B1 443 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 SNX10Q9Y5X0 201 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 KIAA0100Q14667 2235 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 BCLAF3A2AJT9 711 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 H3BN98 237 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 PITPNM1O00562 1244 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 FCHO1O14526 889 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 BANF1O75531 89 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 AP2A1O95782 977 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 HIST1H2ABP04908 130 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 KRT8P05787 483 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ABHD2P08910 425 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 POU2F2P09086 479 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 HOXB2P14652 356 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ITPKAP23677 461 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 VARSP26640 1264 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 CMPK1P30085 196 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ACTR1BP42025 376 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ARRB1P49407 418 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 DRG2P55039 364 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ACTR1AP61163 376 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 GHRHRQ02643 423 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 NCF4Q15080 339 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 MAPKAPK3Q16644 382 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ANKDD1AQ495B1 522 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 IRGCQ6NXR0 463 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 HIST3H2AQ7L7L0 130 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 SCAIQ8N9R8 606 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ZBTB8BQ8NAP8 495 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 PIWIL2Q8TC59 973 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms