RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 C2CD4AQ8NCU7 369 aaPredicted RBP15.94■□□□□ 0.14
TRIM65-204ENST00000543309 UHMK1Q8TAS1 419 aaKnown RBP15.94■□□□□ 0.14
TRIM65-204ENST00000543309 SLC44A1Q8WWI5 657 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 ULK4Q96C45 1275 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 AP2M1Q96CW1 435 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 TOE1Q96GM8 510 aaKnown RBP15.94■□□□□ 0.14
TRIM65-204ENST00000543309 SPACA7Q96KW9 195 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 CPNE1Q99829 537 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 DHRS4Q9BTZ2 278 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 SLC17A9Q9BYT1 436 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 TPSD1Q9BZJ3 242 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 SMYD2Q9NRG4 433 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 IARS2Q9NSE4 1012 aaKnown RBP15.94■□□□□ 0.14
TRIM65-204ENST00000543309 IL1RAPL1Q9NZN1 696 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 ZNF180Q9UJW8 692 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 COQ6Q9Y2Z9 468 aa15.94■□□□□ 0.14
TRIM65-204ENST00000543309 EP300Q09472 2414 aaPredicted RBP15.94■□□□□ 0.14
TRIM65-204ENST00000543309 OR51F1A6NGY5 319 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 CXorf49A8MYA2 514 aaPredicted RBP15.93■□□□□ 0.14
TRIM65-204ENST00000543309 GOLGA8KD6RF30 607 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 GOLGA8TH3BQL2 631 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 LATO43561 262 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 SLC1A2P43004 574 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 LEPRP48357 1165 aaKnown RBP15.93■□□□□ 0.14
TRIM65-204ENST00000543309 TTPAP49638 278 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 CHRNA6Q15825 494 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 USP39Q53GS9 565 aaKnown RBP15.93■□□□□ 0.14
TRIM65-204ENST00000543309 ZRANB3Q5FWF4 1079 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 RFLNAQ6ZTI6 216 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 CTAGE3PQ8IX95 158 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 RIBC1Q8N443 379 aaPredicted RBP15.93■□□□□ 0.14
TRIM65-204ENST00000543309 DENND6BQ8NEG7 585 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 ZNF398Q8TD17 642 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 SCAMP4Q969E2 229 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 ZIM3Q96PE6 472 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 LENG8Q96PV6 779 aaPredicted RBP15.93■□□□□ 0.14
TRIM65-204ENST00000543309 VPS35Q96QK1 796 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 PAFAH2Q99487 392 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 AGAP2Q99490 1192 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 TTC1Q99614 292 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 RIOK2Q9BVS4 552 aaKnown RBP15.93■□□□□ 0.14
TRIM65-204ENST00000543309 SPATA16Q9BXB7 569 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 ASB8Q9H765 288 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 INTS10Q9NVR2 710 aaKnown RBP15.93■□□□□ 0.14
TRIM65-204ENST00000543309 ZNF446Q9NWS9 450 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 TXNDC16Q9P2K2 825 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 FBXO5Q9UKT4 447 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 FBXO4Q9UKT5 387 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 IKBKGQ9Y6K9 419 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 FANCMQ8IYD8 2048 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 TRPM6Q9BX84 2022 aa15.93■□□□□ 0.14
TRIM65-204ENST00000543309 RASGRF2O14827 1237 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 INHBAP08476 426 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 GP5P40197 560 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 MSH2P43246 934 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 CSE1LP55060 971 aaKnown RBP15.92■□□□□ 0.14
TRIM65-204ENST00000543309 PPP2CBP62714 309 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 PPP2CAP67775 309 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 ZNF844Q08AG5 666 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 EFTUD2Q15029 972 aaKnown RBP eCLIP15.92■□□□□ 0.143e-6■■■■□ 20
TRIM65-204ENST00000543309 LRRC14Q15048 493 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 SETMARQ53H47 684 aaPredicted RBP15.92■□□□□ 0.14
TRIM65-204ENST00000543309 KIAA0895LQ68EN5 471 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 PSAPL1Q6NUJ1 521 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 ADGRD1Q6QNK2 874 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 SLC36A4Q6YBV0 504 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 WDR5BQ86VZ2 330 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 PIANPQ8IYJ0 282 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 NXPE1Q8N323 547 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 OTUD6BQ8N6M0 293 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 PPM1NQ8N819 430 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 CADM4Q8NFZ8 388 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 CENPTQ96BT3 561 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 RUFY1Q96T51 708 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 MCMBPQ9BTE3 642 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 FAM126AQ9BYI3 521 aaPredicted RBP15.92■□□□□ 0.14
TRIM65-204ENST00000543309 MARCH4Q9P2E8 410 aaPredicted RBP15.92■□□□□ 0.14
TRIM65-204ENST00000543309 CD84Q9UIB8 345 aa15.92■□□□□ 0.14
TRIM65-204ENST00000543309 FNDC3AQ9Y2H6 1198 aaKnown RBP15.92■□□□□ 0.14
TRIM65-204ENST00000543309 FAM47DPA6NHR8 397 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 CDH16O75309 829 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 S1PR4O95977 384 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 SOD1P00441 154 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 ACRV1P26436 265 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 CNTFP26441 200 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 GCAP28676 217 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 PMLP29590 882 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 SERPINB9P50453 376 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 ADARP55265 1226 aaKnown RBP15.91■□□□□ 0.14
TRIM65-204ENST00000543309 FGL2Q14314 439 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 ITIH4Q14624 930 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 WSCD2Q2TBF2 565 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 ATP13A5Q4VNC0 1218 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 GRTP1Q5TC63 336 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 ADAMTSL4Q6UY14 1074 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 PACS1Q6VY07 963 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 TAS2R42Q7RTR8 314 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 DENND6AQ8IWF6 608 aa15.91■□□□□ 0.14
TRIM65-204ENST00000543309 TP53I13Q8NBR0 393 aaPredicted RBP15.91■□□□□ 0.14
TRIM65-204ENST00000543309 DDHD1Q8NEL9 900 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms