RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 PTP4A2Q12974 167 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 MAMLD1Q13495 774 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 ARHGEF6Q15052 776 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 NFIL3Q16649 462 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 SERTAD4-AS1Q5TG53 156 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 BTN2A1Q7KYR7 527 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 LRRC8DQ7L1W4 858 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 ADGRG6Q86SQ4 1221 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 SDCCAG8Q86SQ7 713 aaPredicted RBP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 SATL1Q86VE3 508 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 EXOC3L1Q86VI1 746 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 SCML4Q8N228 414 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 WDTC1Q8N5D0 677 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 OTUD6BQ8N6M0 293 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 PLD5Q8N7P1 536 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 ZNF441Q8N8Z8 693 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 POC1AQ8NBT0 407 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 LNX1Q8TBB1 728 aaPredicted RBP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 METTL6Q8TCB7 284 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 CENPTQ96BT3 561 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 CALML4Q96GE6 196 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 OR1F2PQ96R84 312 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 PASKQ96RG2 1323 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 IWS1Q96ST2 819 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 NCAPGQ9BPX3 1015 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 MXRA8Q9BRK3 442 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 GPATCH1Q9BRR8 931 aaKnown RBP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 FTOQ9C0B1 505 aaKnown RBP eCLIP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 OR10A4Q9H209 315 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 CCDC177Q9NQR7 707 aaPredicted RBP3.57□□□□□ -1.84
LEMD3-204ENST00000542032 KIAA1456Q9P272 454 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 CDC14AQ9UNH5 594 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 RABL2BQ9UNT1 228 aa3.57□□□□□ -1.84
LEMD3-204ENST00000542032 CGNL1Q0VF96 1302 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 SYNRGQ9UMZ2 1314 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 KDM3AQ9Y4C1 1321 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 hDV102S1A0JD36 115 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 SH2B2O14492 632 aaPredicted RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 TNPO2O14787 897 aaKnown RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 LINC01565O15544 149 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 ADAM20O43506 726 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 PLRG1O43660 514 aaKnown RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 TGDSO95455 350 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 HEXAP06865 529 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 SP1P08047 785 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 HSPA1AP0DMV8 641 aaKnown RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 HSPA1BP0DMV9 641 aaKnown RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 SLC2A4P14672 509 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 STMN1P16949 149 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 EDN2P20800 178 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 DGKAP23743 735 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 GARSP41250 739 aaKnown RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 PAFAH1B1P43034 410 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 EFNA5P52803 228 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 HDAC4P56524 1084 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 HSD17B7P56937 341 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 PPARDQ03181 441 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 LRMPQ12912 555 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 STK4Q13043 487 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 ZBTB17Q13105 803 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 CHAF1BQ13112 559 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 ZNF766Q5HY98 468 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 CES5AQ6NT32 575 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 ANKRD54Q6NXT1 300 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 INO80CQ6PI98 192 aaPredicted RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 IKBIPQ70UQ0 350 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 MTSS1LQ765P7 747 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 MCM10Q7L590 875 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 CCDC91Q7Z6B0 441 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 NOXA1Q86UR1 476 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 CEP97Q8IW35 865 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 KIAA2013Q8IYS2 634 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 SRBD1Q8N5C6 995 aaKnown RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 NAT8LQ8N9F0 302 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 TNIP2Q8NFZ5 429 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 GOT1L1Q8NHS2 421 aaPredicted RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 NFKBIDQ8NI38 313 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 TANKQ92844 425 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 MTBPQ96DY7 904 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 CSF3RQ99062 836 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 NDST4Q9H3R1 872 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 ESRP2Q9H6T0 727 aaKnown RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 SYNCQ9H7C4 482 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 NOX4Q9NPH5 578 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 SNTG1Q9NSN8 517 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 C1RLQ9NZP8 487 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 C5AR2Q9P296 337 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 WDR35Q9P2L0 1181 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 EPS15L1Q9UBC2 864 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 PEMTQ9UBM1 199 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 TBK1Q9UHD2 729 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 XPO7Q9UIA9 1087 aaKnown RBP3.56□□□□□ -1.84
LEMD3-204ENST00000542032 SIX4Q9UIU6 781 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 CARD8Q9Y2G2 431 aa3.56□□□□□ -1.84
LEMD3-204ENST00000542032 ATXN2Q99700 1313 aaKnown RBP3.55□□□□□ -1.84
LEMD3-204ENST00000542032 GAGE10A6NGK3 116 aa3.55□□□□□ -1.84
LEMD3-204ENST00000542032 HNRNPCL2B2RXH8 293 aa3.55□□□□□ -1.84
LEMD3-204ENST00000542032 MPHOSPH10O00566 681 aaKnown RBP3.55□□□□□ -1.84
LEMD3-204ENST00000542032 SLC7A4O43246 635 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms