RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 RPS21P63220 83 aaKnown RBP9.29□□□□□ -0.92
DDX55-208ENST00000541259 PRAMEP78395 509 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 SRSF5Q13243 272 aaKnown RBP9.29□□□□□ -0.92
DDX55-208ENST00000541259 EFTUD2Q15029 972 aaKnown RBP eCLIP9.29□□□□□ -0.92
DDX55-208ENST00000541259 WSCD2Q2TBF2 565 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 HSP90AA5PQ58FG0 334 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 ZRANB3Q5FWF4 1079 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 ARMC3Q5W041 872 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 KIAA1161Q6NSJ0 714 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 PSAPL1Q6NUJ1 521 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 NEK5Q6P3R8 708 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 LDB1Q86U70 411 aaPredicted RBP9.29□□□□□ -0.92
DDX55-208ENST00000541259 WDR5BQ86VZ2 330 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 KCNMB4Q86W47 210 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 TRIM69Q86WT6 500 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 PIANPQ8IYJ0 282 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 NRSN1Q8IZ57 195 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 MREGQ8N565 214 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 PLA2G15Q8NCC3 412 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 OR4L1Q8NH43 312 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 PEX13Q92968 403 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 FUBP1Q96AE4 644 aaKnown RBP9.29□□□□□ -0.92
DDX55-208ENST00000541259 NUS1Q96E22 293 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 CCDC97Q96F63 343 aaPredicted RBP9.29□□□□□ -0.92
DDX55-208ENST00000541259 CERS2Q96G23 380 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 TTC25Q96NG3 672 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 MYOCQ99972 504 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 FZD3Q9NPG1 666 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 PPANQ9NQ55 473 aaKnown RBP9.29□□□□□ -0.92
DDX55-208ENST00000541259 MBNL1Q9NR56 388 aaKnown RBP9.29□□□□□ -0.92
DDX55-208ENST00000541259 IARS2Q9NSE4 1012 aaKnown RBP9.29□□□□□ -0.92
DDX55-208ENST00000541259 PLA2G2EQ9NZK7 142 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 MAP10Q9P2G4 905 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 TMPRSS11EQ9UL52 423 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 CA5BQ9Y2D0 317 aa9.29□□□□□ -0.92
DDX55-208ENST00000541259 ZFC3H1O60293 1989 aaKnown RBP9.29□□□□□ -0.92
DDX55-208ENST00000541259 RGSL1A5PLK6 1076 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 FAM159BA6NKW6 160 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 FADS2P1A8MWK0 482 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 CD3EAPO15446 510 aaKnown RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 NDUFS2O75306 463 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 SRP72O76094 671 aaKnown RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 FSBPO95073 299 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 PRAMEF1O95521 474 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 SOD1P00441 154 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 F12P00748 615 aaPredicted RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 PCCBP05166 539 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 PAMP19021 973 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 SGCGQ13326 291 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 CTBP1Q13363 440 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 FRG1Q14331 258 aaKnown RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 IRF4Q15306 451 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 KBTBD12Q3ZCT8 623 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 ATP13A5Q4VNC0 1218 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 USP39Q53GS9 565 aaKnown RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 HENMT1Q5T8I9 393 aaKnown RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 TEDDM1Q5T9Z0 273 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 KIAA0895LQ68EN5 471 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 PDPK2PQ6A1A2 396 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 NEPROQ6NW34 567 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 ZNF765Q7L2R6 523 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 CYP2U1Q7Z449 544 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 DENND6AQ8IWF6 608 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 TP53I13Q8NBR0 393 aaPredicted RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 ARMC2Q8NEN0 867 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 OR2W6PQ8NHA6 318 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 ZNF398Q8TD17 642 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 ANKRD7Q92527 254 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 CENPTQ96BT3 561 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 BIRC7Q96CA5 298 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 AP2M1Q96CW1 435 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 MRRFQ96E11 262 aaKnown RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 PLEKHG4BQ96PX9 1271 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 KLF6Q99612 283 aaPredicted RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 C19orf43Q9BQ61 176 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 SPATA16Q9BXB7 569 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 FUT8Q9BYC5 575 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 ASB8Q9H765 288 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 ARFGAP3Q9NP61 516 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 CATSPERZQ9NTU4 200 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 FBXO4Q9UKT5 387 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 CNOT6Q9ULM6 557 aaKnown RBP9.28□□□□□ -0.92
DDX55-208ENST00000541259 PSAT1Q9Y617 370 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 ANKRD12Q6UB98 2062 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 CUL9Q8IWT3 2517 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 TMEM131Q92545 1883 aa9.28□□□□□ -0.92
DDX55-208ENST00000541259 LRP4O75096 1905 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 ADAMTS9Q9P2N4 1935 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 A0A087WUV0 522 aaPredicted RBP9.27□□□□□ -0.93
DDX55-208ENST00000541259 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 METTL12A8MUP2 240 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 INPP4BO15327 924 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 LATO43561 262 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 SPAG6O75602 509 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 FAM155BO75949 473 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 ABHD2P08910 425 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 GABRB3P28472 473 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 GCAP28676 217 aa9.27□□□□□ -0.93
DDX55-208ENST00000541259 STX2P32856 288 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms