RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CRCPO75575 148 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 SOAT2O75908 522 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 PARNO95453 639 aaKnown RBP10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 RBP1P09455 135 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 OCM2P0CE71 109 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 OCMP0CE72 109 aaPredicted RBP10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 RFC2P35250 354 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 PIK3CGP48736 1102 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 ATP6V0D1P61421 351 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 LAPTM4AQ15012 233 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 DUSP28Q4G0W2 176 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 PERM1Q5SV97 790 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 PAQR3Q6TCH7 311 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 PDZD8Q8NEN9 1154 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 TOP1MTQ969P6 601 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 SMARCD1Q96GM5 515 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 TSGA13Q96PP4 275 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 CHID1Q9BWS9 393 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 EPS8L2Q9H6S3 715 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 AGO3Q9H9G7 860 aaKnown RBP10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 SMPD3Q9NY59 655 aaPredicted RBP10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 ABCD2Q9UBJ2 740 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 PCDHA9Q9Y5H5 950 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 ST14Q9Y5Y6 855 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 TCRBV5S2A0A599 114 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 NPEPPSL1A6NEC2 478 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 RASAL1O95294 804 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 PEX11BO96011 259 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 MYL3P08590 195 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 AGXTP21549 392 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 PRKACGP22612 351 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 MAP4P27816 1152 aaKnown RBP10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 FMO4P31512 558 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 CAPGP40121 348 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 CLCN5P51795 746 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 NRG1Q02297 640 aaPredicted RBP10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 ABRAXAS1Q6UWZ7 409 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 DCDC5Q6ZRR9 648 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 MFSD2AQ8NA29 543 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 TRPV3Q8NET8 790 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 GPRC5AQ8NFJ5 357 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 SNX19Q92543 992 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 SEPT8Q92599 483 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 BIRC7Q96CA5 298 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 LHPPQ9H008 270 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 SLC52A3Q9NQ40 469 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 VPS45Q9NRW7 570 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 COQ6Q9Y2Z9 468 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 SH3GLB1Q9Y371 365 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 A0A1W2PQH9 124 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 H0YJX3 145 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 ACVRL1P37023 503 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 ZFP36L2P47974 494 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 YWHAHQ04917 246 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 NFATC3Q12968 1075 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 NR1D2Q14995 579 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 INTS6LQ5JSJ4 861 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 DHRS4L2Q6PKH6 230 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 SCD5Q86SK9 330 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 STK32CQ86UX6 486 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 MIB1Q86YT6 1006 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 IRGQQ8WZA9 623 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 PGAP3Q96FM1 320 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 SP110Q9HB58 689 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 VTA1Q9NP79 307 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 SARS2Q9NP81 518 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 ACTR3BQ9P1U1 418 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 U3KQV3 271 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 FUOMA2VDF0 154 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 LDB2O43679 373 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 F9P00740 461 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 PIGAP37287 484 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 KPNA2P52292 529 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 MFSD10Q14728 455 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 MEP1AQ16819 746 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 INTS11Q5TA45 600 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 LCN8Q6JVE9 175 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 SYVN1Q86TM6 617 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 CDYL2Q8N8U2 506 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 OR52B6Q8NGF0 335 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 FBXO30Q8TB52 745 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 CCDC97Q96F63 343 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 MAML3Q96JK9 1138 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 FAR2Q96K12 515 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 C9orf16Q9BUW7 83 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 TBC1D23Q9NUY8 699 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 ARL5CA6NH57 179 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 IQCF5A8MTL0 148 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 PTGES3LE9PB15 166 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 ZNF37AP17032 561 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 HMOX2P30519 316 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 HTR6P50406 440 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 RELAQ04206 551 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 CLCQ05315 142 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 AQP6Q13520 282 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 SPCS2Q15005 226 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 NKG7Q16617 165 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 DDR2Q16832 855 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 XKR4Q5GH76 650 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 EGFLAMQ63HQ2 1017 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms