RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 CROTQ9UKG9 612 aa9.51□□□□□ -0.89
TTC39C-203ENST00000540918 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ISM1B1AKI9 464 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ANKRD66B4E2M5 251 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 TRIM24O15164 1050 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 AQP1P29972 269 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ELF3P78545 371 aaPredicted RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 PAFAH1B3Q15102 231 aaKnown RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 CHRNA6Q15825 494 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 PLEKHG4Q58EX7 1191 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 GCNT7Q6ZNI0 430 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 GPRIN3Q6ZVF9 776 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ANKRD46Q86W74 232 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 LZICQ8WZA0 190 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 APOLD1Q96LR9 279 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 PRPF18Q99633 342 aaKnown RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 OSBPL6Q9BZF3 934 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 PHACTR1Q9C0D0 580 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 RNF38Q9H0F5 515 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 OSER1Q9NX31 292 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 TBC1D14Q9P2M4 693 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 NCKAP1Q9Y2A7 1128 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 RAP2CQ9Y3L5 183 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 THSD7AQ9UPZ6 1657 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 C1QTNF3-AMACRE9PGA6 284 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 CDC7O00311 574 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 DNTTP04053 509 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 LBPP18428 481 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ATP6V1E1P36543 226 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ARSDP51689 593 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 CREMQ03060 361 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 TEDDM1Q5T9Z0 273 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 PARGQ86W56 976 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 OOSP2Q86WS3 158 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 TCEAL4Q96EI5 215 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 PPM1MQ96MI6 270 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 LENG8Q96PV6 779 aaPredicted RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 OR2AG1Q9H205 316 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 NUP205Q92621 2012 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 SLCO1B7G3V0H7 640 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 SAP18O00422 153 aaKnown RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ERAL1O75616 437 aaKnown RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 OAZ2O95190 189 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 COX4I1P13073 169 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 DDX5P17844 614 aaKnown RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 RPIAP49247 311 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 VAC14Q08AM6 782 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 VPS26BQ4G0F5 336 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 RALGPS1Q5JS13 557 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 TMEM154Q6P9G4 183 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 TMEM220Q6QAJ8 160 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 AMIGO2Q86SJ2 522 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 HPS6Q86YV9 775 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ST13P4Q8IZP2 240 aaPredicted RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 BEND7Q8N7W2 519 aaPredicted RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ACMSDQ8TDX5 336 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 PLD4Q96BZ4 506 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 PPP1R16AQ96I34 528 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 FAR2Q96K12 515 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 SLC2A13Q96QE2 648 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 CCDC3Q9BQI4 270 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 HEPHQ9BQS7 1158 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ZCCHC2Q9C0B9 1178 aaKnown RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 IPPKQ9H8X2 491 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 WDR6Q9NNW5 1121 aaKnown RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 DOCK3Q8IZD9 2030 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 BRWD3Q6RI45 1802 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 ZNF839A8K0R7 811 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 H3BQ06 376 aaPredicted RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 DCLK1O15075 740 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 POP4O95707 220 aaKnown RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 GRK3P35626 688 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 SPAM1P38567 509 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 GRIA3P42263 894 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 NCALDP61601 193 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 IRF5Q13568 498 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 TBCELQ5QJ74 424 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 FBXO46Q6PJ61 603 aaPredicted RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 TMPRSS11BQ86T26 416 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 SETD3Q86TU7 594 aaPredicted RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 RALGPS2Q86X27 583 aaPredicted RBP9.5□□□□□ -0.89
TTC39C-203ENST00000540918 RAD9AQ99638 391 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 PRDM16Q9HAZ2 1276 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 GALPQ9UBC7 116 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 POLG2Q9UHN1 485 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 DTNAQ9Y4J8 743 aa9.5□□□□□ -0.89
TTC39C-203ENST00000540918 HIDE1A8MVS5 230 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 MAFKO60675 156 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 HNRNPCL1O60812 293 aaKnown RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 MMP20O60882 483 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 SERPINI2O75830 405 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 MAPK8P45983 427 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 NIPAL4Q0D2K0 466 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 SERINC3Q13530 473 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 MBTPS1Q14703 1052 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 VITQ6UXI7 678 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 DPY19L3Q6ZPD9 716 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 RBM15BQ8NDT2 890 aaKnown RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 BHLHE22Q8NFJ8 381 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms