RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 NMBRP28336 390 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 MPLP40238 635 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 GRIA4P48058 902 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 LIMK1P53667 647 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 MAGOHP61326 146 aaKnown RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 CREB5Q02930 508 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 FGL2Q14314 439 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 POU6F1Q14863 301 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 SF3A2Q15428 464 aaKnown RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 CCDC6Q16204 474 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 AASDHQ4L235 1098 aaPredicted RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 SETMARQ53H47 684 aaPredicted RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 LRRC73Q5JTD7 316 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 SEL1L3Q68CR1 1132 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 ERAP2Q6P179 960 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 ARMCX6Q7L4S7 300 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 KDELC2Q7Z4H8 507 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 RABEPKQ7Z6M1 372 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 EXOC3L1Q86VI1 746 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 SLC25A41Q8N5S1 370 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
ATL3-204ENST00000540699 PPHLN1Q8NEY8 458 aaKnown RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 IFT43Q96FT9 208 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 CERS2Q96G23 380 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 ZNF778Q96MU6 729 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 LENG8Q96PV6 779 aaPredicted RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 STMN4Q9H169 189 aaPredicted RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 CENPHQ9H3R5 247 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 SUSD2Q9UGT4 822 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 EIF2B4Q9UI10 523 aaKnown RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 RIMKLBQ9ULI2 386 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 CHKBQ9Y259 395 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 SLCO1B1Q9Y6L6 691 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 WDFY3Q8IZQ1 3526 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 BPTFQ12830 3046 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 A0A1B0GTW7 788 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 HEATR9A2RTY3 570 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 MROH6A6NGR9 719 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 CAPN8A6NHC0 703 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 NPIPB15A6NHN6 443 aaPredicted RBP10.56□□□□□ -0.72
ATL3-204ENST00000540699 ANKRD66B4E2M5 251 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 PSMD11O00231 422 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 POLR3GO15318 223 aaPredicted RBP10.56□□□□□ -0.72
ATL3-204ENST00000540699 UGT1A9O60656 530 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 PRKCGP05129 697 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 GM2AP17900 193 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 NR1D1P20393 614 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 PSMA3P25788 255 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 NFKBIAP25963 317 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 ARNTP27540 789 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 ATP5DP30049 168 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 VIPR1P32241 457 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 MSH2P43246 934 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 ARCN1P48444 511 aaKnown RBP10.56□□□□□ -0.72
ATL3-204ENST00000540699 MGAT5Q09328 741 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 GALNT3Q14435 633 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 TMED2Q15363 201 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 QPCTQ16769 361 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 DUOXA1Q1HG43 343 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 TSTD2Q5T7W7 516 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 KIAA0930Q6ICG6 404 aaPredicted RBP10.56□□□□□ -0.72
ATL3-204ENST00000540699 SLC23A3Q6PIS1 610 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 KDM7AQ6ZMT4 941 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 USP45Q70EL2 814 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 TRABD2AQ86V40 505 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 SLC26A11Q86WA9 606 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 LRRC6Q86X45 466 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 RAVER1Q8IY67 606 aaKnown RBP10.56□□□□□ -0.72
ATL3-204ENST00000540699 NDUFAF2Q8N183 169 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 PPM1NQ8N819 430 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 TMEM145Q8NBT3 493 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 DENND6BQ8NEG7 585 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 CEP76Q8TAP6 659 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 FAM76AQ8TAV0 307 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 PDCD6IPQ8WUM4 868 aaKnown RBP10.56□□□□□ -0.72
ATL3-204ENST00000540699 PIGKQ92643 395 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 KLF6Q99612 283 aaPredicted RBP10.56□□□□□ -0.72
ATL3-204ENST00000540699 SLC17A9Q9BYT1 436 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 UGT1A7Q9HAW7 530 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 UGT1A10Q9HAW8 530 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 UGT1A8Q9HAW9 530 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 CAPN10Q9HC96 672 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 TM9SF3Q9HD45 589 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 RXFP3Q9NSD7 469 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 B4GALT6Q9UBX8 382 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 ACTL7BQ9Y614 415 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 BAHCC1Q9P281 2608 aa10.56□□□□□ -0.72
ATL3-204ENST00000540699 ASCC3Q8N3C0 2202 aaKnown RBP10.56□□□□□ -0.72
ATL3-204ENST00000540699 ZZEF1O43149 2961 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 LRP4O75096 1905 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 A0A1W2PR77 199 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 IGLON5A6NGN9 336 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 PRAMEF26H0Y7S4 382 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 NEMP1O14524 444 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 TM4SF5O14894 197 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 BCAT2O15382 392 aaPredicted RBP10.55□□□□□ -0.72
ATL3-204ENST00000540699 LDB2O43679 373 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 MMP20O60882 483 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 FAM155BO75949 473 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 CYP2A6P11509 494 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms