RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 IL31Q6EBC2 164 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 Q6ZNX1 250 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 MRPL10Q7Z7H8 261 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 PGBD5Q8N414 524 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 TERB1Q8NA31 727 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 DNAJB14Q8TBM8 379 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 PSMG2Q969U7 264 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 SLC39A13Q96H72 371 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 PLEKHG4BQ96PX9 1271 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 SEZ6LQ9BYH1 1024 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 INTS10Q9NVR2 710 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 TMEM248Q9NWD8 314 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 BTRCQ9Y297 605 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 TLR6Q9Y2C9 796 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 TYW5A2RUC4 315 aaKnown RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 CCDC162PA2VCL2 907 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 ATE1O95260 518 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 CLIC3O95833 236 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 PRR35P0CG20 571 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 MTHFD1P11586 935 aaKnown RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 VARSP26640 1264 aaKnown RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 ETFBP38117 255 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 RPS9P46781 194 aaKnown RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 APLP1P51693 650 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 KCNK10P57789 538 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 TSPY1Q01534 308 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 LIPEQ05469 1076 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 SEMA3AQ14563 771 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 C16orf72Q14CZ0 275 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 OVOS1Q6IE37 1185 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 GDF6Q6KF10 455 aaPredicted RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 MSANTD2Q6P1R3 559 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 ZNF554Q86TJ5 538 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 SPATA2LQ8IUW3 424 aaPredicted RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 STAG3L4Q8TBR4 150 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 KIAA1191Q96A73 305 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 KCTD14Q9BQ13 255 aaPredicted RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 AARSD1Q9BTE6 412 aaKnown RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 DCUN1D5Q9BTE7 237 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 TRIM8Q9BZR9 551 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 RPF2Q9H7B2 306 aaKnown RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 FAIMQ9NVQ4 179 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 ANAPC2Q9UJX6 822 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 PATJQ8NI35 1801 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 ASPDHA6ND91 283 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 H3BMQ9 156 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 GIPC1O14908 333 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 KERAO60938 352 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 CYBBP04839 570 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 EEF1DP29692 281 aaKnown RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 HMOX2P30519 316 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 EEFSECP57772 596 aaKnown RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 RCAN2Q14206 197 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 RAB39AQ14964 217 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 AASDHQ4L235 1098 aaPredicted RBP12.23□□□□□ -0.45
NPC1-202ENST00000540608 RABL3Q5HYI8 236 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 USP51Q70EK9 711 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 IFNEQ86WN2 208 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 ZNF354CQ86Y25 554 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 COG8Q96MW5 612 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 ZNF599Q96NL3 588 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.23□□□□□ -0.451e-6■■■□□ 18.6
NPC1-202ENST00000540608 ZNF639Q9UID6 485 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 Q9Y3F1 56 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 ARL5AQ9Y689 179 aa12.23□□□□□ -0.45
NPC1-202ENST00000540608 TRPM7Q96QT4 1865 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 A0A1B0GTL3 188 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 EEDO75530 441 aaKnown RBP12.22□□□□□ -0.45
NPC1-202ENST00000540608 RPP40O75818 363 aaKnown RBP12.22□□□□□ -0.45
NPC1-202ENST00000540608 CNTN5O94779 1100 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 IMPDH2P12268 514 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 ZFP36L2P47974 494 aaKnown RBP12.22□□□□□ -0.45
NPC1-202ENST00000540608 PTPRCAPQ14761 206 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 ALFQ53S48 1182 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 ANKS6Q68DC2 871 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 CXCL17Q6UXB2 119 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 FBXO39Q8N4B4 442 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 SMYD1Q8NB12 490 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 OR4L1Q8NH43 312 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 MAGEE2Q8TD90 523 aaPredicted RBP12.22□□□□□ -0.45
NPC1-202ENST00000540608 RSPH1Q8WYR4 309 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 VPS33AQ96AX1 596 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 THAP11Q96EK4 314 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 POLR1BQ9H9Y6 1135 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 SYTL2Q9HCH5 934 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 CATSPERZQ9NTU4 200 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 AIG1Q9NVV5 245 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 PKD2L2Q9NZM6 624 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 PTPRDP23468 1912 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 TRIM64BA6NI03 449 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 F8W810 466 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 MGEA5O60502 916 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 CRCPO75575 148 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 LDLRP01130 860 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 NCK1P16333 377 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 OGNP20774 298 aaKnown RBP12.22□□□□□ -0.45
NPC1-202ENST00000540608 ADARB1P78563 741 aaKnown RBP12.22□□□□□ -0.45
NPC1-202ENST00000540608 MS4A13Q5J8X5 152 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 PAGE3Q5JUK9 113 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 GPR107Q5VW38 600 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms