RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 CTBSQ01459 385 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 PTPRCAPQ14761 206 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 PYCR3Q53H96 274 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 SEL1L2Q5TEA6 688 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 CDCP2Q5VXM1 449 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 SLC30A9Q6PML9 568 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 KDF1Q8NAX2 398 aaPredicted RBP14.95□□□□□ -0.02
UBE3B-212ENST00000540230 MAPK15Q8TD08 544 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 PATE1Q8WXA2 126 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 SCG3Q8WXD2 468 aaKnown RBP14.95□□□□□ -0.02
UBE3B-212ENST00000540230 ZCCHC14Q8WYQ9 949 aaKnown RBP14.95□□□□□ -0.02
UBE3B-212ENST00000540230 FSD1LQ9BXM9 530 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 DPEP2Q9H4A9 486 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 TRNAU1APQ9NX07 287 aaKnown RBP14.95□□□□□ -0.02
UBE3B-212ENST00000540230 NCKIPSDQ9NZQ3 722 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 TMPRSS11EQ9UL52 423 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 CLCA2Q9UQC9 943 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 GPSM3Q9Y4H4 160 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 PCDHB1Q9Y5F3 818 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 C5orf60A6NFR6 353 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 GPR39O43194 453 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 ANXA9O76027 345 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 METTL18O95568 372 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 FGF1P05230 155 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 CA5AP35218 305 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 HMGCLP35914 325 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 RPIAP49247 311 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 SPARCL1Q14515 664 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 RPS6KA1Q15418 735 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 OGFOD3Q6PK18 319 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 RANBP10Q6VN20 620 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 GLT6D1Q7Z4J2 308 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 SLC13A5Q86YT5 568 aaPredicted RBP14.94□□□□□ -0.02
UBE3B-212ENST00000540230 KLHDC8BQ8IXV7 354 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 TAB3Q8N5C8 712 aaPredicted RBP14.94□□□□□ -0.02
UBE3B-212ENST00000540230 TRAM1L1Q8N609 369 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 DCBLD1Q8N8Z6 715 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 GLMNQ92990 594 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 CCDC74AQ96AQ1 378 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 OR2M4Q96R27 311 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 CCDC3Q9BQI4 270 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 FERMT1Q9BQL6 677 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 TLR10Q9BXR5 811 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 KCNF1Q9H3M0 494 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 EVA1BQ9NVM1 165 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 IL17CQ9P0M4 197 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 TAAR2Q9P1P5 351 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 ZMIZ1Q9ULJ6 1067 aa14.94□□□□□ -0.02
UBE3B-212ENST00000540230 ZNF106Q9H2Y7 1883 aaKnown RBP14.94□□□□□ -0.02
UBE3B-212ENST00000540230 TAF4O00268 1085 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 MTX2O75431 263 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 STK10O94804 968 aaKnown RBP14.93□□□□□ -0.02
UBE3B-212ENST00000540230 MAZP56270 477 aaKnown RBP14.93□□□□□ -0.02
UBE3B-212ENST00000540230 ILF3Q12906 894 aaKnown RBP eCLIP14.93□□□□□ -0.02
UBE3B-212ENST00000540230 MSLNQ13421 630 aaPredicted RBP14.93□□□□□ -0.02
UBE3B-212ENST00000540230 SIX1Q15475 284 aaPredicted RBP14.93□□□□□ -0.02
UBE3B-212ENST00000540230 OASLQ15646 514 aaKnown RBP14.93□□□□□ -0.02
UBE3B-212ENST00000540230 KHDC1Q4VXA5 237 aaKnown RBP14.93□□□□□ -0.02
UBE3B-212ENST00000540230 ZNF569Q5MCW4 686 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 DENND5AQ6IQ26 1287 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 PRUNE1Q86TP1 453 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 C1orf54Q8WWF1 131 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 NAT6Q93015 286 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 ALS2CR12Q96Q35 445 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 ZSCAN5AQ9BUG6 496 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 GSDMCQ9BYG8 508 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 CDH19Q9H159 772 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 CARD9Q9H257 536 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 TRABDQ9H4I3 376 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 VPS18Q9P253 973 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 ATXN10Q9UBB4 475 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 ARL5AQ9Y689 179 aa14.93□□□□□ -0.02
UBE3B-212ENST00000540230 KMT2BQ9UMN6 2715 aaPredicted RBP14.93□□□□□ -0.02
UBE3B-212ENST00000540230 GAPDHSO14556 408 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 LIASO43766 372 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 EML2O95834 649 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 ZNF8P17098 575 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 ACTR1BP42025 376 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 TNNT3P45378 269 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 ACTR1AP61163 376 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 HLTFQ14527 1009 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 ATP13A5Q4VNC0 1218 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 C14orf28Q4W4Y0 310 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 KCTD11Q693B1 232 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 MICALCLQ6ZW33 695 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 GALNT13Q8IUC8 556 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 NAGSQ8N159 534 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 ZDHHC1Q8WTX9 485 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 GLYATL1Q969I3 302 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 PLEKHG4BQ96PX9 1271 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 SRPK1Q96SB4 655 aaKnown RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 ABCG4Q9H172 646 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 IL26Q9NPH9 171 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 AAR2Q9Y312 384 aaKnown RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 KCTD3Q9Y597 815 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 RNF215Q9Y6U7 377 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 A0A1W2PQM1 296 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 SLC25A14O95258 325 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 PDX1P52945 283 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 CYP4F3Q08477 520 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms