RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CNOT3O75175 753 aaKnown RBP9.96□□□□□ -0.82
TRAF1-202ENST00000540010 GALTP07902 379 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 SLC16A1P53985 500 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 BOP1Q14137 746 aaKnown RBP9.96□□□□□ -0.82
TRAF1-202ENST00000540010 LRTOMTQ8WZ04 291 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 PPM1MQ96MI6 270 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 CFHR5Q9BXR6 569 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 UGT2B28Q9BY64 529 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 GBA3Q9H227 469 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 EIF2B3Q9NR50 452 aaKnown RBP9.96□□□□□ -0.82
TRAF1-202ENST00000540010 A0A0J9YYE9 177 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 AP2A1O95782 977 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 KRT6AP02538 564 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 KRT6BP04259 564 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 FESP07332 822 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 DNAJB2P25686 324 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 MAGEA6P43360 314 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 KRT6CP48668 564 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 PGFP49763 221 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 IL2P60568 153 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 DMPKQ09013 629 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 DLG1Q12959 904 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 MRPL28Q13084 256 aaKnown RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 RNF19BQ6ZMZ0 732 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 BHLHA9Q7RTU4 235 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 LGI2Q8N0V4 545 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 CLYBLQ8N0X4 340 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 FSTL5Q8N475 847 aaPredicted RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 CBR4Q8N4T8 237 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 OR7A2PQ8NGA2 310 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 ADGRE3Q9BY15 652 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 TMEM245Q9H330 911 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 UXTQ9UBK9 157 aaPredicted RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 STK39Q9UEW8 545 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 SH3BP1Q9Y3L3 701 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 MTMR11A4FU01 709 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 TNFRSF10BO14763 440 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 AZIN1O14977 448 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 PSMD7P51665 324 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 SEMA3BQ13214 749 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 PRKG2Q13237 762 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 SPIDRQ14159 915 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 RGS21Q2M5E4 152 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 USP41Q3LFD5 358 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 SLC9B1Q4ZJI4 515 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 RSBN1Q5VWQ0 802 aaPredicted RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 ESRP1Q6NXG1 681 aaKnown RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 SCML4Q8N228 414 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 SLC39A8Q9C0K1 460 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 PLGRKTQ9HBL7 147 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 ABCB10Q9NRK6 738 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 CATSPERZQ9NTU4 200 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 EURLQ9NYK6 297 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 HS3ST4Q9Y661 456 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 KNL1Q8NG31 2342 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 LZTS3O60299 673 aaPredicted RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 TLR5O60602 858 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 GSTM1P09488 218 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 ZNF37AP17032 561 aaPredicted RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 NMBRP28336 390 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 PBLDP30039 288 aaPredicted RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 MAPKAPK3Q16644 382 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 INSCQ1MX18 579 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 PPM1LQ5SGD2 360 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 METTL21CQ5VZV1 264 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 RALGPS2Q86X27 583 aaPredicted RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 TERB1Q8NA31 727 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 FBXO22Q8NEZ5 403 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 TEKT5Q96M29 485 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 POLR1EQ9GZS1 481 aaKnown RBP9.95□□□□□ -0.82
TRAF1-202ENST00000540010 HMG20AQ9NP66 347 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 LNPEPQ9UIQ6 1025 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 DMTF1Q9Y222 760 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 TLR6Q9Y2C9 796 aa9.95□□□□□ -0.82
TRAF1-202ENST00000540010 INPPL1O15357 1258 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 WEE1P30291 646 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 MAGEA11P43364 429 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 PIK3CGP48736 1102 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 LIMK2P53671 638 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 GPR17Q13304 367 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 ARMC4Q5T2S8 1044 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 GPR158Q5T848 1215 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 FRMD7Q6ZUT3 714 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 BEND5Q7L4P6 421 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 C14orf80Q86SX3 495 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 BBS7Q8IWZ6 715 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 PHTF2Q8N3S3 785 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 ESAMQ96AP7 390 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 MAGED4Q96JG8 741 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 PANX3Q96QZ0 392 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 ZYG11BQ9C0D3 744 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 PIDD1Q9HB75 910 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 TRAFD1O14545 582 aaPredicted RBP9.94□□□□□ -0.82
TRAF1-202ENST00000540010 S100A3P33764 101 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 ST13P50502 369 aaKnown RBP9.94□□□□□ -0.82
TRAF1-202ENST00000540010 NAA20P61599 178 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 CARTPTQ16568 116 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 TTC23Q5W5X9 447 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 C16orf59Q7L2K0 433 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms