RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ZDHHC12Q96GR4 267 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 STN1Q9H668 368 aaKnown RBP12.57□□□□□ -0.4
DDX55-206ENST00000539934 SYNDIG1Q9H7V2 258 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 MCCC2Q9HCC0 563 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 THG1LQ9NWX6 298 aaKnown RBP12.57□□□□□ -0.4
DDX55-206ENST00000539934 TXNDC16Q9P2K2 825 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 CDH7Q9ULB5 785 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 ESYT3A0FGR9 886 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 M0QZ92 97 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 RNF103O00237 685 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 GNB5O14775 395 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 ITM2AO43736 263 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 NDUFS2O75306 463 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 CILPO75339 1184 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 AKAP5P24588 427 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 HOXC8P31273 242 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 OR1G1P47890 313 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 NR1H2P55055 460 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 RPP30P78346 268 aaKnown RBP12.56□□□□□ -0.4
DDX55-206ENST00000539934 CDK16Q00536 496 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 CREB5Q02930 508 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 PTPN11Q06124 597 aaPredicted RBP12.56□□□□□ -0.4
DDX55-206ENST00000539934 GALNT3Q14435 633 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 GLRA4Q5JXX5 417 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 MIB1Q86YT6 1006 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 KLHL36Q8N4N3 616 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 DPP10Q8N608 796 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 ZNF366Q8N895 744 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 ICA1LQ8NDH6 482 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 ADCY4Q8NFM4 1077 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 BEST2Q8NFU1 509 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 TRUB1Q8WWH5 349 aaKnown RBP12.56□□□□□ -0.4
DDX55-206ENST00000539934 AKAP1Q92667 903 aaKnown RBP eCLIP12.56□□□□□ -0.4
DDX55-206ENST00000539934 TMEM176AQ96HP8 235 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 OSBPL2Q9H1P3 480 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 TRIT1Q9H3H1 467 aaKnown RBP12.56□□□□□ -0.4
DDX55-206ENST00000539934 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.56□□□□□ -0.4
DDX55-206ENST00000539934 DTNAQ9Y4J8 743 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 NFS1Q9Y697 457 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 CLUHO75153 1309 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 LINC00587B1AMM8 73 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 L7N2F9 121 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 ZNF701M0R085 212 aaPredicted RBP12.56□□□□□ -0.4
DDX55-206ENST00000539934 LINC01565O15544 149 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 TIPRLO75663 272 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 PROSCO94903 275 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 SLITRK5O94991 958 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 SEMA3DO95025 777 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 KRT81Q14533 505 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 PPP2R5EQ16537 467 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 TCHHL1Q5QJ38 904 aaPredicted RBP12.56□□□□□ -0.4
DDX55-206ENST00000539934 HECTD3Q5T447 861 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 DNAJC24Q6P3W2 148 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 UGT2A3Q6UWM9 527 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 FEZF2Q8TBJ5 459 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 TLCD1Q96CP7 247 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 PABPC5Q96DU9 382 aaKnown RBP12.56□□□□□ -0.4
DDX55-206ENST00000539934 TXNDC15Q96J42 360 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 TWNKQ96RR1 684 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 TCF25Q9BQ70 676 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 TBC1D10AQ9BXI6 508 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 OSGEPL1Q9H4B0 414 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 SLA2Q9H6Q3 261 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 AGO1Q9UL18 857 aaKnown RBP12.56□□□□□ -0.4
DDX55-206ENST00000539934 PCDHGB7Q9Y5F8 929 aa12.56□□□□□ -0.4
DDX55-206ENST00000539934 A0A1W2PQ72 361 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 TM9SF1O15321 606 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 CDC123O75794 336 aaPredicted RBP12.55□□□□□ -0.4
DDX55-206ENST00000539934 PGM3O95394 542 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 PLGP00747 810 aaPredicted RBP12.55□□□□□ -0.4
DDX55-206ENST00000539934 UQCRBP14927 111 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 GRIK1P39086 918 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 ELOAQ14241 798 aaKnown RBP12.55□□□□□ -0.4
DDX55-206ENST00000539934 FASTKD3Q14CZ7 662 aaKnown RBP12.55□□□□□ -0.4
DDX55-206ENST00000539934 DENND1BQ6P3S1 775 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 DCUN1D2Q6PH85 259 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 ARSKQ6UWY0 536 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 LRRC6Q86X45 466 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 Q8N9G6 341 aaPredicted RBP12.55□□□□□ -0.4
DDX55-206ENST00000539934 ZNF527Q8NB42 609 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 MYDGFQ969H8 173 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 MSANTD3Q96H12 275 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 CELF4Q9BZC1 486 aaKnown RBP12.55□□□□□ -0.4
DDX55-206ENST00000539934 DCLK3Q9C098 648 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 TINAGL1Q9GZM7 467 aaPredicted RBP12.55□□□□□ -0.4
DDX55-206ENST00000539934 ELOVL4Q9GZR5 314 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 RMND5AQ9H871 391 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 BRD7Q9NPI1 651 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 GDAP2Q9NXN4 497 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 PRELID3BQ9Y3B1 194 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 NR2E1Q9Y466 385 aa12.55□□□□□ -0.4
DDX55-206ENST00000539934 FAM221AA4D161 298 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 EFCAB10A6NFE3 127 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 H0YJX3 145 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 ERVH48-1M5A8F1 160 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 STMN1P16949 149 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 NR4A1P22736 598 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 HNF4AP41235 474 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 CARSP49589 748 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms