RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 PATE1Q8WXA2 126 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 RAPGEF5Q92565 580 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 KRT35Q92764 455 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 USP7Q93009 1102 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 MED8Q96G25 268 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 SEMA3CQ99985 751 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 NUDT22Q9BRQ3 303 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 TRMT1Q9NXH9 659 aaKnown RBP13.93□□□□□ -0.18
CCND1-204ENST00000539241 FOXJ2Q9P0K8 574 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 SEPT10Q9P0V9 454 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 CD84Q9UIB8 345 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 PCDHA3Q9Y5H8 950 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 ST14Q9Y5Y6 855 aa13.93□□□□□ -0.18
CCND1-204ENST00000539241 C9orf172C9J069 976 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 SOD1P00441 154 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 CD48P09326 243 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 GARSP41250 739 aaKnown RBP13.92□□□□□ -0.18
CCND1-204ENST00000539241 ACTR1BP42025 376 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 GPR3P46089 330 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 EPHB1P54762 984 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 ACTR1AP61163 376 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 GALNT2Q10471 571 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 CLPPQ16740 277 aaPredicted RBP13.92□□□□□ -0.18
CCND1-204ENST00000539241 ADAMTSL4Q6UY14 1074 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 USP53Q70EK8 1073 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 ZFAND4Q86XD8 727 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 NAGSQ8N159 534 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 UBL4BQ8N7F7 174 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 EXD1Q8NHP7 514 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 FAF2Q96CS3 445 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 AP2M1Q96CW1 435 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 SGF29Q96ES7 293 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 SCARF2Q96GP6 870 aaPredicted RBP13.92□□□□□ -0.18
CCND1-204ENST00000539241 SMIM14Q96QK8 99 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 OR2M4Q96R27 311 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 POLR1EQ9GZS1 481 aaKnown RBP13.92□□□□□ -0.18
CCND1-204ENST00000539241 CDH19Q9H159 772 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 ABCG8Q9H221 673 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 PLEKHM1Q9Y4G2 1056 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 UNC13CQ8NB66 2214 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 PIEZO2Q9H5I5 2752 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 ANKRD36A6QL64 1941 aa13.92□□□□□ -0.18
CCND1-204ENST00000539241 A0A0J9YYE9 177 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 C3orf70A6NLC5 250 aaPredicted RBP13.91□□□□□ -0.18
CCND1-204ENST00000539241 USP27XA6NNY8 438 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 B8ZZF3 427 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 HGSO14964 777 aaPredicted RBP13.91□□□□□ -0.18
CCND1-204ENST00000539241 ZRANB2O95218 330 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCND1-204ENST00000539241 TRBC1P01850 177 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 ZNF30P17039 623 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 CD82P27701 267 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 CD1CP29017 333 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 PTSQ03393 145 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 TAZQ16635 292 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 ANKRD20A8PQ5CZ79 823 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 MANEAQ5SRI9 462 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 NCBP2-AS2Q69YL0 99 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 ALG1LQ6GMV1 187 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 TIGD7Q6NT04 549 aaPredicted RBP13.91□□□□□ -0.18
CCND1-204ENST00000539241 ZNF765Q7L2R6 523 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 TRIM74Q86UV6 250 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 VASH2Q86V25 355 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 RCOR2Q8IZ40 523 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCND1-204ENST00000539241 MAML1Q92585 1016 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 SCAMP4Q969E2 229 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 HES6Q96HZ4 224 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 RBM41Q96IZ5 413 aaKnown RBP13.91□□□□□ -0.18
CCND1-204ENST00000539241 KCND1Q9NSA2 647 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 TMEM98Q9Y2Y6 226 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 TTLL3Q9Y4R7 772 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 PCDHB11Q9Y5F2 797 aa13.91□□□□□ -0.18
CCND1-204ENST00000539241 IGHV5-10-1A0A0J9YXX1 117 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 MATN3O15232 486 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 PPM1DO15297 605 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 KIF5CO60282 957 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 MAP3K6O95382 1288 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 PYGLP06737 847 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 CCL4P13236 92 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 CES1P23141 567 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 STC1P52823 247 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 RWDD2BP57060 319 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 DSC2Q02487 901 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 PAFAH1B3Q15102 231 aaKnown RBP13.9□□□□□ -0.18
CCND1-204ENST00000539241 TMEM164Q5U3C3 297 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 NKAIN2Q5VXU1 208 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 MFSD7Q6UXD7 560 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 SPOCD1Q6ZMY3 1216 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 ZNF574Q6ZN55 896 aaPredicted RBP13.9□□□□□ -0.18
CCND1-204ENST00000539241 MARK2Q7KZI7 788 aaKnown RBP13.9□□□□□ -0.18
CCND1-204ENST00000539241 NLRP8Q86W28 1048 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 DTX1Q86Y01 620 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 RCBTB1Q8NDN9 531 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 ALG3Q92685 438 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 RNF25Q96BH1 459 aaPredicted RBP13.9□□□□□ -0.18
CCND1-204ENST00000539241 CCDC74BQ96LY2 380 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 RNF157Q96PX1 679 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 AGAP2Q99490 1192 aa13.9□□□□□ -0.18
CCND1-204ENST00000539241 TDRD1Q9BXT4 1180 aaKnown RBP13.9□□□□□ -0.18
CCND1-204ENST00000539241 B3GNT4Q9C0J1 378 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms