RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 GPS1Q13098 491 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 MRPL49Q13405 166 aaKnown RBP8.09□□□□□ -1.11
TUBD1-206ENST00000539018 TRADDQ15628 312 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 CCDC142Q17RM4 750 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 UAP1L1Q3KQV9 507 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 CCDC38Q502W7 563 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 PPP6R3Q5H9R7 873 aaPredicted RBP8.09□□□□□ -1.11
TUBD1-206ENST00000539018 BRMS1LQ5PSV4 323 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 RNASEH2BQ5TBB1 312 aaKnown RBP8.09□□□□□ -1.11
TUBD1-206ENST00000539018 TXNRD3NBQ6F5E7 133 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 PM20D1Q6GTS8 502 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 TRNP1Q6NT89 227 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 DARS2Q6PI48 645 aaKnown RBP8.09□□□□□ -1.11
TUBD1-206ENST00000539018 FBXO46Q6PJ61 603 aaPredicted RBP8.09□□□□□ -1.11
TUBD1-206ENST00000539018 SLC39A5Q6ZMH5 540 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 PAQR9Q6ZVX9 377 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 CYP4V2Q6ZWL3 525 aaPredicted RBP8.09□□□□□ -1.11
TUBD1-206ENST00000539018 CTU1Q7Z7A3 348 aaKnown RBP8.09□□□□□ -1.11
TUBD1-206ENST00000539018 CCDC25Q86WR0 208 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 PALM2Q8IXS6 379 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 PQLC1Q8N2U9 271 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 SH2D3CQ8N5H7 860 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 DBF4BQ8NFT6 615 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 OR2I1PQ8NGU4 316 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 HASPINQ8TF76 798 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 CKAP2Q8WWK9 683 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 HDAC10Q969S8 669 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 HSPBAP1Q96EW2 488 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 C8orf48Q96LL4 319 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 ZNF317Q96PQ6 595 aaPredicted RBP8.09□□□□□ -1.11
TUBD1-206ENST00000539018 PKMYT1Q99640 499 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 SELENOSQ9BQE4 189 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 SIKE1Q9BRV8 207 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 HERPUD2Q9BSE4 406 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 ZCWPW1Q9H0M4 648 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 NRDE2Q9H7Z3 1164 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 CD248Q9HCU0 757 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 ABCC13Q9NSE7 274 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 OLA1Q9NTK5 396 aaKnown RBP8.09□□□□□ -1.11
TUBD1-206ENST00000539018 SMPD4Q9NXE4 827 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 NINJ2Q9NZG7 142 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 FZD10Q9ULW2 581 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 SH3BP1Q9Y3L3 701 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
TUBD1-206ENST00000539018 ERI2A8K979 691 aaKnown RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 RASA4BC9J798 803 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 EEF2KO00418 725 aaKnown RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 PSMD3O43242 534 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 HOXA3O43365 443 aaPredicted RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 RASA4O43374 803 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 NBNO60934 754 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 DCTN3O75935 186 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 SLC2A3P11169 496 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 BRAFP15056 766 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 TPSB2P20231 275 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 BDNFP23560 247 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 SLC8A1P32418 973 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 HCAR3P49019 387 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 VPS41P49754 854 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 RPL10AP62906 217 aaKnown RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 COG7P83436 770 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 ACTN3Q08043 901 aaPredicted RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 PDK1Q15118 436 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 LLGL1Q15334 1064 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 TAF5Q15542 800 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 TPSAB1Q15661 275 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 FAM214AQ32MH5 1076 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 CTXN3Q4LDR2 81 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 SLC39A12Q504Y0 691 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 SLC45A4Q5BKX6 768 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 PRAMEF14Q5SWL7 426 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 STXBP5Q5T5C0 1151 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 BNIPLQ7Z465 357 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 EXOC3L1Q86VI1 746 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 SUGP1Q8IWZ8 645 aaKnown RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 CCDC13Q8IYE1 715 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 GABPB2Q8TAK5 448 aaPredicted RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 CLEC4CQ8WTT0 213 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 RNF139Q8WU17 664 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 ANKRD27Q96NW4 1050 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 SERPINB11Q96P15 392 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 QKIQ96PU8 341 aaKnown RBP eCLIP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 CSPG4P5Q96PW8 444 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 CDK5RAP1Q96SZ6 601 aaKnown RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 VAT1Q99536 393 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 RTP3Q9BQQ7 232 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 PAAF1Q9BRP4 392 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 VPS11Q9H270 941 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 MANSC1Q9H8J5 431 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 EIF2B3Q9NR50 452 aaKnown RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 LANCL2Q9NS86 450 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 MRGBPQ9NV56 204 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 DDIT4Q9NX09 232 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 ANKRD6Q9Y2G4 727 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 ARL2BPQ9Y2Y0 163 aa8.08□□□□□ -1.12
TUBD1-206ENST00000539018 PRG3Q9Y2Y8 225 aaPredicted RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 USP15Q9Y4E8 981 aaPredicted RBP8.08□□□□□ -1.12
TUBD1-206ENST00000539018 TMEM120BA0PK00 339 aa8.07□□□□□ -1.12
TUBD1-206ENST00000539018 CCT8L1PA6NM43 557 aa8.07□□□□□ -1.12
TUBD1-206ENST00000539018 TBKBP1A7MCY6 615 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms