RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 HTR3CQ8WXA8 447 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 TAAR9Q96RI9 348 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 WDR24Q96S15 920 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 DPYSL5Q9BPU6 564 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 ARHGAP9Q9BRR9 750 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 PCDH9Q9HC56 1237 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 VPS18Q9P253 973 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 RPL26L1Q9UNX3 145 aaKnown RBP12.42□□□□□ -0.42
VAMP1-206ENST00000538970 ARHGEF17Q96PE2 2063 aaPredicted RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 UNC13CQ8NB66 2214 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 SYCE3A1L190 88 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 TERTO14746 1132 aaKnown RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 ASMTLO95671 621 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 NTRK1P04629 796 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 ATP1A1P05023 1023 aaKnown RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 FAM87AP0C7U9 286 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 MX2P20592 715 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 CSTF2P33240 577 aaKnown RBP eCLIP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 CYP4F2P78329 520 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 TBR1Q16650 682 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 HENMT1Q5T8I9 393 aaKnown RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 TMEM71Q6P5X7 295 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 ZNF761Q86XN6 746 aaPredicted RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 MAP7D3Q8IWC1 876 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 CCDC112Q8NEF3 446 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 JPH3Q8WXH2 748 aaPredicted RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 ART4Q93070 314 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 NKD1Q969G9 470 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 HDAC11Q96DB2 347 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 DDA1Q9BW61 102 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 ZMYND15Q9H091 742 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 DTLQ9NZJ0 730 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 CTTNBP2NLQ9P2B4 639 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 PDP2Q9P2J9 529 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 UVRAGQ9P2Y5 699 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 CNOT6Q9ULM6 557 aaKnown RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 LUC7L2Q9Y383 392 aaKnown RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 B3GALT1Q9Y5Z6 326 aa12.41□□□□□ -0.42
VAMP1-206ENST00000538970 OAS3Q9Y6K5 1087 aaKnown RBP12.41□□□□□ -0.42
VAMP1-206ENST00000538970 TRBV23OR9-2A0A075B6M9 112 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 C1orf232A0A0U1RR37 186 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 A6NCN8 305 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 FADS2P1A8MWK0 482 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 B4E171 279 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 DUX1O43812 170 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 MMP2P08253 660 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 KRT7P08729 469 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 ITGB6P18564 788 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 UGT1A3P35503 534 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 TSPAN7P41732 249 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 SPINT3P49223 89 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 ATP1A2P50993 1020 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 SLC10A2Q12908 348 aaPredicted RBP12.4□□□□□ -0.42
VAMP1-206ENST00000538970 QPCTQ16769 361 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 CHST15Q7LFX5 561 aaPredicted RBP12.4□□□□□ -0.42
VAMP1-206ENST00000538970 CCDC13Q8IYE1 715 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 BMPERQ8N8U9 685 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 OR10G6Q8NH81 332 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 SLC38A3Q99624 504 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 STARD5Q9NSY2 213 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 OCIAD1Q9NX40 245 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 ANKMY1Q9P2S6 941 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 TBC1D29Q9UFV1 150 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 PRKAB1Q9Y478 270 aa12.4□□□□□ -0.42
VAMP1-206ENST00000538970 SDK2Q58EX2 2172 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 RGSL1A5PLK6 1076 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 EFCAB7A8K855 629 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 KCNK1O00180 336 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 H2AFZP0C0S5 128 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 ACP5P13686 325 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 HNRNPH3P31942 346 aaKnown RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 CASP14P31944 242 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 MAN1A1P33908 653 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 CD86P42081 329 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 RAB15P59190 212 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 IFI35P80217 286 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 HHEXQ03014 270 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 PPIDQ08752 370 aaKnown RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 ZBTB17Q13105 803 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 WDR74Q6RFH5 385 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 H2AFVQ71UI9 128 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 FAM129CQ86XR2 697 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 PLD5Q8N7P1 536 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 CNTD1Q8N815 330 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 CCNYQ8ND76 341 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 CTNNBL1Q8WYA6 563 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 RAPGEF5Q92565 580 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 AHCYL2Q96HN2 611 aaKnown RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 ZNF830Q96NB3 372 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 HERPUD2Q9BSE4 406 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 MLPHQ9BV36 600 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 SLC12A9Q9BXP2 914 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 ASPSCR1Q9BZE9 553 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 FAM117AQ9C073 453 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 FAM83DQ9H4H8 585 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 STN1Q9H668 368 aaKnown RBP12.39□□□□□ -0.43
VAMP1-206ENST00000538970 RMI1Q9H9A7 625 aa12.39□□□□□ -0.43
VAMP1-206ENST00000538970 SARS2Q9NP81 518 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms