RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 H0Y626 953 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 UBDO15205 165 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 PSMD3O43242 534 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 VPS4BO75351 444 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 GPC4O75487 556 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 TIPRLO75663 272 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 PIAS1O75925 651 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 CSPG5O95196 566 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 TRIM16O95361 564 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 MATN4O95460 622 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 GFAPP14136 432 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 GPD1P21695 349 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 CXCR2P25025 360 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 ACVR2AP27037 513 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 S100A5P33763 92 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 RYKP34925 604 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 DDOSTP39656 456 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 EIF2DP41214 584 aaKnown RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 CASP3P42574 277 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 NPY2RP49146 381 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 LIG4P49917 911 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 ALDH3A2P51648 485 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 TKTL1P51854 596 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 KPNA1P52294 538 aaPredicted RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 IST1P53990 364 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 P2RX3P56373 397 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 CSNK2BP67870 215 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 IGBP1P78318 339 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 PRKCDQ05655 676 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 NME3Q13232 169 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 CDK10Q15131 360 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 NEDD8Q15843 81 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 ZYXQ15942 572 aaKnown RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 CTF1Q16619 201 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 XKR9Q5GH70 373 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 ARL13AQ5H913 290 aaPredicted RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 PPP6R3Q5H9R7 873 aaPredicted RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 MFSD14BQ5SR56 506 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 FAM102BQ5T8I3 360 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 AGAP6Q5VW22 663 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 NXNQ6DKJ4 435 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 TWF2Q6IBS0 349 aaKnown RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 PNCKQ6P2M8 343 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 NAPRTQ6XQN6 538 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SLC16A12Q6ZSM3 486 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SAPCD2Q86UD0 394 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SLCO6A1Q86UG4 719 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SLC22A16Q86VW1 577 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 XYLT1Q86Y38 959 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 RIOX2Q8IUF8 465 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 EPHX4Q8IUS5 362 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 LIX1LQ8IVB5 337 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 ADGRG5Q8IZF4 528 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SPARTQ8N0X7 666 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 CLEC4FQ8N1N0 589 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SVOPLQ8N434 492 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 DCLK2Q8N568 766 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 WDTC1Q8N5D0 677 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 ZSWIM2Q8NEG5 633 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 OR13J1Q8NGT2 312 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 HCAR2Q8TDS4 363 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 CAPSLQ8WWF8 208 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 CYGBQ8WWM9 190 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 DPF3Q92784 378 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SPATA13Q96N96 652 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 AGAP4Q96P64 663 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 FAM213AQ9BRX8 229 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 MCMBPQ9BTE3 642 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 PI4K2AQ9BTU6 479 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 HERC2P3Q9BVR0 1158 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 FUNDC2Q9BWH2 189 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 MTMR12Q9C0I1 747 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 LHPPQ9H008 270 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 ING2Q9H160 280 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 ACAD9Q9H845 621 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SIAEQ9HAT2 523 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 APOBEC3GQ9HC16 384 aaKnown RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 AGO4Q9HCK5 861 aaKnown RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 GPRC5CQ9NQ84 441 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 PDLIM7Q9NR12 457 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 USE1Q9NZ43 259 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 TBC1D14Q9P2M4 693 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 SAE1Q9UBE0 346 aaPredicted RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 UBA2Q9UBT2 640 aaPredicted RBP6.68□□□□□ -1.34
USP28-207ENST00000538475 KCNN3Q9UGI6 736 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 ZNF221Q9UK13 617 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 BAG5Q9UL15 447 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 MKLN1Q9UL63 735 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 AP3M1Q9Y2T2 418 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 CNTNAP1P78357 1384 aa6.68□□□□□ -1.34
USP28-207ENST00000538475 PRR19A6NJB7 356 aa6.67□□□□□ -1.34
USP28-207ENST00000538475 CLDN24A6NM45 220 aa6.67□□□□□ -1.34
USP28-207ENST00000538475 CENPXA8MT69 81 aa6.67□□□□□ -1.34
USP28-207ENST00000538475 TARM1B6A8C7 271 aa6.67□□□□□ -1.34
USP28-207ENST00000538475 PSMD11O00231 422 aa6.67□□□□□ -1.34
USP28-207ENST00000538475 BET1O15155 118 aa6.67□□□□□ -1.34
USP28-207ENST00000538475 SHOXO15266 292 aa6.67□□□□□ -1.34
USP28-207ENST00000538475 HOXC11O43248 304 aaPredicted RBP6.67□□□□□ -1.34
USP28-207ENST00000538475 TBC1D4O60343 1298 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms