RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 SOD1P00441 154 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 CPP00450 1065 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 FGF5P12034 268 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 SLC2A4P14672 509 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 AMD1P17707 334 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 TNFAIP3P21580 790 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 PTPN4P29074 926 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 TPI1P60174 286 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 AP1S1P61966 158 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 RPS15P62841 145 aaKnown RBP11.03□□□□□ -0.64
CLPB-208ENST00000538021 NSUN2Q08J23 767 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLPB-208ENST00000538021 PTPRRQ15256 657 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 FAM199XQ6PEV8 388 aaPredicted RBP11.03□□□□□ -0.64
CLPB-208ENST00000538021 RFLNAQ6ZTI6 216 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 SYVN1Q86TM6 617 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 NOP9Q86U38 636 aaKnown RBP11.03□□□□□ -0.64
CLPB-208ENST00000538021 TSPAN33Q86UF1 283 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 RHOT1Q8IXI2 618 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 CISD2Q8N5K1 135 aaKnown RBP11.03□□□□□ -0.64
CLPB-208ENST00000538021 RBMXL3Q8N7X1 1067 aaKnown RBP11.03□□□□□ -0.64
CLPB-208ENST00000538021 FDCSPQ8NFU4 85 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 AP2M1Q96CW1 435 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 C11orf70Q9BRQ4 267 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 HERPUD2Q9BSE4 406 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 GPR87Q9BY21 358 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 UNKQ9C0B0 810 aaKnown RBP11.03□□□□□ -0.64
CLPB-208ENST00000538021 ASF1BQ9NVP2 202 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 CPNE7Q9UBL6 633 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 G3BP2Q9UN86 482 aaKnown RBP11.03□□□□□ -0.64
CLPB-208ENST00000538021 PCDHGB7Q9Y5F8 929 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 PCYT1BQ9Y5K3 369 aaPredicted RBP11.03□□□□□ -0.64
CLPB-208ENST00000538021 ATP6V1DQ9Y5K8 247 aa11.03□□□□□ -0.64
CLPB-208ENST00000538021 SETD2Q9BYW2 2564 aaPredicted RBP11.02□□□□□ -0.65
CLPB-208ENST00000538021 A0A0U1RQS6 177 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.02□□□□□ -0.65
CLPB-208ENST00000538021 A0A1W2PQ67 120 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 PSMD11O00231 422 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 DFFAO00273 331 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 ZNF185O15231 689 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 TIAF1O95411 115 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 C9P02748 559 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 KRT3P12035 628 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 ACP5P13686 325 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 GPD1P21695 349 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 RFC1P35251 1148 aaPredicted RBP11.02□□□□□ -0.65
CLPB-208ENST00000538021 PTGIRP43119 386 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 MTIF2P46199 727 aaKnown RBP11.02□□□□□ -0.65
CLPB-208ENST00000538021 CDK18Q07002 472 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 DPTQ07507 201 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 IL10RAQ13651 578 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLPB-208ENST00000538021 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 ADAMTSL4Q6UY14 1074 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 ARHGAP36Q6ZRI8 547 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 CBARPQ8N350 705 aaPredicted RBP11.02□□□□□ -0.65
CLPB-208ENST00000538021 SLC30A5Q8TAD4 765 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 SCAMP4Q969E2 229 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 TIGD1Q96MW7 591 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 AGAP2Q99490 1192 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 SELENOOQ9BVL4 669 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 NUDT9Q9BW91 350 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 ABCG8Q9H221 673 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 AKIRIN1Q9H9L7 192 aaPredicted RBP11.02□□□□□ -0.65
CLPB-208ENST00000538021 FZD10Q9ULW2 581 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 PHTF1Q9UMS5 762 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 ENTPD4Q9Y227 616 aa11.02□□□□□ -0.65
CLPB-208ENST00000538021 KIR2DS5A0A0G2JLQ3 304 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 A0A0G2JNG1 304 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 GOLGA6L3A6NEY3 463 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 LILRA5A6NI73 299 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 OR5K4A6NMS3 321 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 KIR2DS3K7RE56 304 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 TOX3O15405 576 aaPredicted RBP11.01□□□□□ -0.65
CLPB-208ENST00000538021 HTRA2O43464 458 aaPredicted RBP11.01□□□□□ -0.65
CLPB-208ENST00000538021 KIF1CO43896 1103 aaKnown RBP11.01□□□□□ -0.65
CLPB-208ENST00000538021 UBXN7O94888 489 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 ATP1A1P05023 1023 aaKnown RBP11.01□□□□□ -0.65
CLPB-208ENST00000538021 F3P13726 295 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 CTPS1P17812 591 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 MMP8P22894 467 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 RENBPP51606 427 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 ITGA1P56199 1179 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 RFTN1Q14699 578 aaPredicted RBP11.01□□□□□ -0.65
CLPB-208ENST00000538021 KIR2DS5Q14953 304 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 TMCO4Q5TGY1 634 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 CACHD1Q5VU97 1274 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 SP5Q6BEB4 398 aaPredicted RBP11.01□□□□□ -0.65
CLPB-208ENST00000538021 FAM92BQ6ZTR7 304 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 TECPR1Q7Z6L1 1165 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 MCEMP1Q8IX19 187 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 IQCKQ8N0W5 287 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 RANBP9Q96S59 729 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 PDE7BQ9NP56 450 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 OGFRQ9NZT2 677 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 KIAA1468Q9P260 1216 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 RARRES3Q9UL19 164 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 FARSAQ9Y285 508 aaKnown RBP11.01□□□□□ -0.65
CLPB-208ENST00000538021 FHOD1Q9Y613 1164 aa11.01□□□□□ -0.65
CLPB-208ENST00000538021 F5H423 210 aaPredicted RBP11□□□□□ -0.65
CLPB-208ENST00000538021 DAPK3O43293 454 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms