RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 UBALD2Q8IYN6 164 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 ALKBH8Q96BT7 664 aaKnown RBP11.65□□□□□ -0.54
SPARC-207ENST00000537849 SIPA1Q96FS4 1042 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 ATXN7L3BQ96GX2 97 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 MRGPRX1Q96LB2 322 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 BIRC8Q96P09 236 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 ASB2Q96Q27 587 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 SMC6Q96SB8 1091 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 RIOK2Q9BVS4 552 aaKnown RBP11.65□□□□□ -0.54
SPARC-207ENST00000537849 CDH19Q9H159 772 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 CAB39LQ9H9S4 337 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 KCNK9Q9NPC2 374 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 SNX15Q9NRS6 342 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 C2orf42Q9NWW7 574 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 CD84Q9UIB8 345 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 FBXL21Q9UKT6 434 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 SLC39A10Q9ULF5 831 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 SCML1Q9UN30 329 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 MRPS17Q9Y2R5 130 aaKnown RBP11.65□□□□□ -0.54
SPARC-207ENST00000537849 COQ6Q9Y2Z9 468 aa11.65□□□□□ -0.54
SPARC-207ENST00000537849 TMEM120BA0PK00 339 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 RECQL5O94762 991 aaPredicted RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 WISP3O95389 354 aaPredicted RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 DNTTP04053 509 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 MPOP05164 745 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 C2P06681 752 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 C6P13671 934 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 GABRG2P18507 467 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 ITGALP20701 1170 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 ACRV1P26436 265 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 TYK2P29597 1187 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 FMO4P31512 558 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 CRHR1P34998 444 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 GMPRP36959 345 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 PTGER3P43115 390 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 SERPINB8P50452 374 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 ATP1A2P50993 1020 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 ADARP55265 1226 aaKnown RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 CDKN2DP55273 166 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 PPARDQ03181 441 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 LRRC32Q14392 662 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 USP10Q14694 798 aaKnown RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 ZKSCAN8Q15776 578 aaPredicted RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 SETMARQ53H47 684 aaPredicted RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 AARS2Q5JTZ9 985 aaKnown RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 HENMT1Q5T8I9 393 aaKnown RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 HECTD2Q5U5R9 776 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 LYPLAL1Q5VWZ2 237 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 ZNF765Q7L2R6 523 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 SYT13Q7L8C5 426 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 CMC1Q7Z7K0 106 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 CACUL1Q86Y37 369 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 SPNS2Q8IVW8 549 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 SIX5Q8N196 739 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 PELI3Q8N2H9 469 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 NXPE1Q8N323 547 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 TRAM1L1Q8N609 369 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 ARFGAP2Q8N6H7 521 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 CCDC97Q96F63 343 aaPredicted RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 DTD2Q96FN9 168 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 ELMO2Q96JJ3 720 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 OLFM1Q99784 485 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 AARSD1Q9BTE6 412 aaKnown RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 FOXQ1Q9C009 403 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 P2RY12Q9H244 342 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 ITM2CQ9NQX7 267 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 MKS1Q9NXB0 559 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 ZDHHC3Q9NYG2 299 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 EBF1Q9UH73 591 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 CNOT6Q9ULM6 557 aaKnown RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 CORO1CQ9ULV4 474 aaPredicted RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 ZFR2Q9UPR6 939 aaKnown RBP11.64□□□□□ -0.55
SPARC-207ENST00000537849 MED16Q9Y2X0 877 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 COL6A3P12111 3177 aa11.64□□□□□ -0.55
SPARC-207ENST00000537849 IGLV3-16A0A075B6K0 115 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 IGLON5A6NGN9 336 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 FADS2P1A8MWK0 482 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 NEMP1O14524 444 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 PLRG1O43660 514 aaKnown RBP11.63□□□□□ -0.55
SPARC-207ENST00000537849 LZTS3O60299 673 aaPredicted RBP11.63□□□□□ -0.55
SPARC-207ENST00000537849 RNASEH2AO75792 299 aaKnown RBP11.63□□□□□ -0.55
SPARC-207ENST00000537849 PKMP14618 531 aaKnown RBP11.63□□□□□ -0.55
SPARC-207ENST00000537849 NDUFV2P19404 249 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 CD9P21926 228 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 RPS3P23396 243 aaKnown RBP eCLIP11.63□□□□□ -0.553e-6■■□□□ 11.4
SPARC-207ENST00000537849 CRABP2P29373 138 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 RPA3P35244 121 aaPredicted RBP11.63□□□□□ -0.55
SPARC-207ENST00000537849 PPARGP37231 505 aaPredicted RBP11.63□□□□□ -0.55
SPARC-207ENST00000537849 WDR4P57081 412 aaKnown RBP11.63□□□□□ -0.55
SPARC-207ENST00000537849 RAB10P61026 200 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 DPTQ07507 201 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 UBXN2BQ14CS0 331 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 AGERQ15109 404 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 RNF187Q5TA31 235 aaPredicted RBP11.63□□□□□ -0.55
SPARC-207ENST00000537849 CDHR3Q6ZTQ4 885 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 USP30Q70CQ3 517 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 CLEC14AQ86T13 490 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 GJD3Q8N144 294 aa11.63□□□□□ -0.55
SPARC-207ENST00000537849 PLD6Q8N2A8 252 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms