RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CDH2P19022 906 aaPredicted RBP14.25□□□□□ -0.13
USP44-203ENST00000537435 TACR2P21452 398 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 SLC5A2P31639 672 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 MAGEA11P43364 429 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 PLOD1Q02809 727 aaPredicted RBP14.25□□□□□ -0.13
USP44-203ENST00000537435 TRIM32Q13049 653 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 TMEM259Q4ZIN3 620 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 ANKS6Q68DC2 871 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 LCN8Q6JVE9 175 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 FAM47BQ8NA70 645 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 TMIGD2Q96BF3 282 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 TRIB3Q96RU7 358 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 CCDC68Q9H2F9 335 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 THEGQ9P2T0 379 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 SPO11Q9Y5K1 396 aa14.25□□□□□ -0.13
USP44-203ENST00000537435 PDLIM1O00151 329 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 IL10P22301 178 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 APLP1P51693 650 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 RAD51Q06609 339 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 BLOC1S3Q6QNY0 202 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 EPHX4Q8IUS5 362 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 CBR4Q8N4T8 237 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 FIBCD1Q8N539 461 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 OR4K2Q8NGD2 314 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 TFAP2CQ92754 450 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 SLC52A3Q9NQ40 469 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 NLE1Q9NVX2 485 aaPredicted RBP14.24□□□□□ -0.13
USP44-203ENST00000537435 ACTR3BQ9P1U1 418 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 ATXN10Q9UBB4 475 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 GPR45Q9Y5Y3 372 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 PLXNA3P51805 1871 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 LCHNA4D1U4 455 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 NCF1BA6NI72 391 aaPredicted RBP14.24□□□□□ -0.13
USP44-203ENST00000537435 NCF1CA8MVU1 366 aaPredicted RBP14.24□□□□□ -0.13
USP44-203ENST00000537435 CDC7O00311 574 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 TMCC1O94876 653 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 RPS17P08708 135 aaKnown RBP14.24□□□□□ -0.13
USP44-203ENST00000537435 NCF1P14598 390 aaPredicted RBP14.24□□□□□ -0.13
USP44-203ENST00000537435 PSMA4P25789 261 aaKnown RBP14.24□□□□□ -0.13
USP44-203ENST00000537435 PRDX3P30048 256 aaKnown RBP14.24□□□□□ -0.13
USP44-203ENST00000537435 ALDH3B2P48448 385 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 ZNF140P52738 457 aaPredicted RBP14.24□□□□□ -0.13
USP44-203ENST00000537435 TRIM71Q2Q1W2 868 aaKnown RBP14.24□□□□□ -0.13
USP44-203ENST00000537435 IFNL1Q8IU54 200 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 ALDH16A1Q8IZ83 802 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 LGI2Q8N0V4 545 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 OR7D4Q8NG98 312 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 B3GALT6Q96L58 329 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 NSMCE3Q96MG7 304 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 GPR21Q99679 349 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 MGME1Q9BQP7 344 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 CCSER2Q9H7U1 834 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 AGPAT4Q9NRZ5 378 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 PCDHA9Q9Y5H5 950 aa14.24□□□□□ -0.13
USP44-203ENST00000537435 NPEPPSL1A6NEC2 478 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 ARPC2O15144 300 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 SEPT4O43236 478 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 VPS4BO75351 444 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 FASP25445 335 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 HOXD9P28356 352 aaPredicted RBP14.23□□□□□ -0.13
USP44-203ENST00000537435 OXTRP30559 389 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 KCNQ1P51787 676 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 NFYCQ13952 458 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 COQ5Q5HYK3 327 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 INTS11Q5TA45 600 aaKnown RBP14.23□□□□□ -0.13
USP44-203ENST00000537435 ALG1LQ6GMV1 187 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 GLT6D1Q7Z4J2 308 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 CAMK1DQ8IU85 385 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 DNAJB14Q8TBM8 379 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 FUBP1Q96AE4 644 aaKnown RBP14.23□□□□□ -0.13
USP44-203ENST00000537435 VPS33AQ96AX1 596 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 RMDN1Q96DB5 314 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 TEX37Q96LM6 180 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 ZNF599Q96NL3 588 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 FAM193BQ96PV7 902 aaPredicted RBP14.23□□□□□ -0.13
USP44-203ENST00000537435 SEPT5Q99719 369 aaPredicted RBP14.23□□□□□ -0.13
USP44-203ENST00000537435 GALPQ9UBC7 116 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 RSL24D1Q9UHA3 163 aaKnown RBP14.23□□□□□ -0.13
USP44-203ENST00000537435 GABRQQ9UN88 632 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 KLHL33A6NCF5 533 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 F5H5T6 163 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 DLGAP1O14490 977 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 NDUFS3O75489 264 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 CYBBP04839 570 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 RPL10P27635 214 aaKnown RBP14.23□□□□□ -0.13
USP44-203ENST00000537435 RGRP47804 291 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 AGTR2P50052 363 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 CDH15P55291 814 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 RING1Q06587 406 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 FOXM1Q08050 763 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 FAM26DQ5JW98 314 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 OGFOD2Q6N063 350 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 AFTPHQ6ULP2 937 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 SYVN1Q86TM6 617 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 IFNEQ86WN2 208 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 ADGRG5Q8IZF4 528 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 BBS5Q8N3I7 341 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 PACRGLQ8N7B6 248 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 MFSD2AQ8NA29 543 aa14.23□□□□□ -0.13
USP44-203ENST00000537435 TMEM125Q96AQ2 219 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms