RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ATP5OP48047 213 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 PTPN11Q06124 597 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 PRPSAP1Q14558 356 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 CA9Q16790 459 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 C2CD6Q53TS8 623 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 MORN1Q5T089 497 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 SPRED1Q7Z699 444 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 PLCZ1Q86YW0 608 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 NODALQ96S42 347 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 TAS2R9Q9NYW1 312 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 DLEC1Q9Y238 1755 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 PSME4Q14997 1843 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 MRASO14807 208 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 UNGP13051 313 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 ALDH4A1P30038 563 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 PSMD8P48556 350 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 STARD3Q14849 445 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 XAF1Q6GPH4 301 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF720Q7Z2F6 126 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 METTL4Q8N3J2 472 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 CELF2-AS1Q8N7Q2 184 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 CIDECQ96AQ7 238 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 FAM213AQ9BRX8 229 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 MUC3BQ9H195 1237 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 INTS10Q9NVR2 710 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 TMEM216Q9P0N5 145 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 RAPGEFL1Q9UHV5 662 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 PCDHGA7Q9Y5G6 932 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 NRCAMQ92823 1304 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 KCNU1A8MYU2 1149 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 MEIS2O14770 477 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 LRPAP1P30533 357 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 ACOT2P49753 483 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 PLEKHG6Q3KR16 790 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 SLC16A12Q6ZSM3 486 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 CLEC4FQ8N1N0 589 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 VANGL1Q8TAA9 524 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 TMEM80Q96HE8 168 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 FANCFQ9NPI8 374 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 ENTPD7Q9NQZ7 604 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 AGPAT4Q9NRZ5 378 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 B3GNT2Q9NY97 397 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 ANAPC2Q9UJX6 822 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 TMCC3Q9ULS5 477 aa10.84□□□□□ -0.67
CLSTN3-207ENST00000537408 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ITGB3P05106 788 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 CDKN2BP42772 138 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 HCAR3P49019 387 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ARPP19P56211 112 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ENPEPQ07075 957 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 PIGHQ14442 188 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ZNF404Q494X3 552 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 CYBRD1Q53TN4 286 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 CHRDL2Q6WN34 429 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 NIPA1Q7RTP0 329 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 PRSS48Q7RTY5 328 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 MICU2Q8IYU8 434 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 RNF149Q8NC42 400 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ADAM32Q8TC27 787 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 TMCO6Q96DC7 493 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 HSFY1Q96LI6 401 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ASB2Q96Q27 587 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 BDH2Q9BUT1 245 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 KIFC1Q9BW19 673 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 FAM105AQ9NUU6 356 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 COQ3Q9NZJ6 369 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 LAMB2P55268 1798 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 NCAM2O15394 837 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ZNF780AO75290 641 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 TOP3BO95985 862 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 LGALS2P05162 132 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 GPIP06744 558 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 PFKMP08237 780 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 EVI2BP34910 448 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 GP5P40197 560 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 SLC10A2Q12908 348 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 EPS8Q12929 822 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 TRIM60Q495X7 471 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 SPANXN2Q5MJ10 180 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ARMC4Q5T2S8 1044 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 PRMT9Q6P2P2 845 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 CASC4Q6P4E1 433 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 GK5Q6ZS86 529 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 AMER2Q8N7J2 671 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 PJA1Q8NG27 643 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 FAR1Q8WVX9 515 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 HDAC10Q969S8 669 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 FKBP10Q96AY3 582 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 SH3KBP1Q96B97 665 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ACSF2Q96CM8 615 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 IKZF4Q9H2S9 585 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 RPF1Q9H9Y2 349 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 NTN4Q9HB63 628 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 CHST12Q9NRB3 414 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 SETD4Q9NVD3 440 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 SNX7Q9UNH6 387 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 SOWAHBA6NEL2 793 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 AGAP5A6NIR3 686 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 LOC110117498-PIK3R3F6TDL0 507 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 TLL1O43897 1013 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms