RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 FCRL4Q96PJ5 515 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 GBP5Q96PP8 586 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 NDC1Q9BTX1 674 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 TTYH3Q9C0H2 523 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 ST7Q9NRC1 585 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 PHPT1Q9NRX4 125 aaPredicted RBP9.34□□□□□ -0.91
CPSF7-217ENST00000537162 SEC14L3Q9UDX4 400 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 ATP8A1Q9Y2Q0 1164 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 MEMO1Q9Y316 297 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 PRKAB1Q9Y478 270 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 CHD3Q12873 2000 aaKnown RBP9.34□□□□□ -0.91
CPSF7-217ENST00000537162 TLN2Q9Y4G6 2542 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 IGLV3-10A0A075B6K4 115 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 LILRA5A6NI73 299 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 ZNHIT1O43257 154 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 GRAP2O75791 330 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 KLF7O75840 302 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-217ENST00000537162 TMCC1O94876 653 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 UBXN7O94888 489 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 NR3C1P04150 777 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 TFE3P19532 575 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-217ENST00000537162 SPAM1P38567 509 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 ARCN1P48444 511 aaKnown RBP9.33□□□□□ -0.92
CPSF7-217ENST00000537162 SUOXP51687 545 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 DGKQP52824 942 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 PPP2R2BQ00005 443 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 RUNX1T1Q06455 604 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 PEX6Q13608 980 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 TLR1Q15399 786 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 GPR19Q15760 415 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 CNGA2Q16280 664 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 ERAP2Q6P179 960 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 ZNF783Q6ZMS7 281 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 SLC9B2Q86UD5 537 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 TMEM126BQ8IUX1 230 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 DMRTC2Q8IXT2 367 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-217ENST00000537162 ULK2Q8IYT8 1036 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 SIDT2Q8NBJ9 832 aaKnown RBP9.33□□□□□ -0.92
CPSF7-217ENST00000537162 CCDC150Q8NCX0 1101 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 OR1N1Q8NGS0 311 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 SH3KBP1Q96B97 665 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 SLC41A2Q96JW4 573 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 FER1L6-AS2Q96M78 137 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 EPB41L1Q9H4G0 881 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 C1GALT1Q9NS00 363 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 PIGVQ9NUD9 493 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 P4HTMQ9NXG6 502 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 CPNE7Q9UBL6 633 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 CNOT8Q9UFF9 292 aaKnown RBP9.33□□□□□ -0.92
CPSF7-217ENST00000537162 MFHAS1Q9Y4C4 1052 aa9.33□□□□□ -0.92
CPSF7-217ENST00000537162 ANK3Q12955 4377 aaKnown RBP9.33□□□□□ -0.92
CPSF7-217ENST00000537162 NKX2-6A6NCS4 301 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 FAM171A2A8MVW0 826 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 E5RJQ4 531 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 DDX3YO15523 660 aaKnown RBP9.32□□□□□ -0.92
CPSF7-217ENST00000537162 LDB2O43679 373 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 SNX2O60749 519 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 SRGAP2O75044 1071 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 ZWINTO95229 277 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 ELFN1P0C7U0 828 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 RORAP35398 523 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 GPD2P43304 727 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 UBE2IP63279 158 aaKnown RBP9.32□□□□□ -0.92
CPSF7-217ENST00000537162 CDK17Q00537 523 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 TFF3Q07654 80 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 CUL2Q13617 745 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 ACOX1Q15067 660 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.32□□□□□ -0.92
CPSF7-217ENST00000537162 PTCHD3Q3KNS1 767 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 CES4AQ5XG92 561 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 CCDC73Q6ZRK6 1079 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 CHSY3Q70JA7 882 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 ACRBPQ8NEB7 543 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 MBD6Q96DN6 1003 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 ZNF514Q96K75 400 aaPredicted RBP9.32□□□□□ -0.92
CPSF7-217ENST00000537162 COX4I2Q96KJ9 171 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 COQ10AQ96MF6 247 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 SLC2A13Q96QE2 648 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 POLDIP3Q9BY77 421 aaKnown RBP9.32□□□□□ -0.92
CPSF7-217ENST00000537162 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.32□□□□□ -0.92
CPSF7-217ENST00000537162 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 SUV39H2Q9H5I1 410 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 TMEM8AQ9HCN3 771 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 RAB20Q9NX57 234 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 SCHIP1Q9P0W5 487 aaPredicted RBP9.32□□□□□ -0.92
CPSF7-217ENST00000537162 LRFN1Q9P244 771 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 KCNK6Q9Y257 313 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 LUC7L2Q9Y383 392 aaKnown RBP9.32□□□□□ -0.92
CPSF7-217ENST00000537162 CLIC4Q9Y696 253 aa9.32□□□□□ -0.92
CPSF7-217ENST00000537162 CFAP69A5D8W1 941 aa9.31□□□□□ -0.92
CPSF7-217ENST00000537162 SART1O43290 800 aaKnown RBP9.31□□□□□ -0.92
CPSF7-217ENST00000537162 CTAG2O75638 210 aa9.31□□□□□ -0.92
CPSF7-217ENST00000537162 IGSF6O95976 241 aa9.31□□□□□ -0.92
CPSF7-217ENST00000537162 KLK3P07288 261 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-217ENST00000537162 AMD1P17707 334 aa9.31□□□□□ -0.92
CPSF7-217ENST00000537162 ABRQ12979 859 aa9.31□□□□□ -0.92
CPSF7-217ENST00000537162 NCF4Q15080 339 aa9.31□□□□□ -0.92
CPSF7-217ENST00000537162 PLA2G4EQ3MJ16 856 aa9.31□□□□□ -0.92
CPSF7-217ENST00000537162 AFMIDQ63HM1 303 aa9.31□□□□□ -0.92
CPSF7-217ENST00000537162 HMBOX1Q6NT76 420 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms