RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 STX5Q13190 355 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 PFKFB4Q16877 469 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 TRIM68Q6AZZ1 485 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 REP15Q6BDI9 236 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 TXNDC11Q6PKC3 985 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 IZUMO2Q6UXV1 221 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 PDSS2Q86YH6 399 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 GDPD5Q8WTR4 605 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 MYO19Q96H55 970 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 MYCBPQ99417 103 aaPredicted RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 NPAS2Q99743 824 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 CXorf56Q9H5V9 222 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 SUCOQ9UBS9 1254 aaKnown RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 ZNF510Q9Y2H8 683 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 CPQQ9Y646 472 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 LRRC14BA6NHZ5 514 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 PFDN6O15212 129 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 STX7O15400 261 aaKnown RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 OR1I1O60431 355 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 VPS26AO75436 327 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 RAG1P15918 1043 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 RPS3P23396 243 aaKnown RBP eCLIP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 CLCN7P51798 805 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 RHOAP61586 193 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 WDR5P61964 334 aaKnown RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 KLC1Q07866 573 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 TSNQ15631 228 aaKnown RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 OGFRL1Q5TC84 451 aaPredicted RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 FAM219BQ5XKK7 198 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 STK40Q8N2I9 435 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 ARL14EPQ8N8R7 260 aaPredicted RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 TWIST2Q8WVJ9 160 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 DLG3Q92796 817 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 GATA6Q92908 595 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 TMA16Q96EY4 203 aaKnown RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 NSUN5Q96P11 429 aaKnown RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 CCDC68Q9H2F9 335 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 TUBB1Q9H4B7 451 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 MRPL17Q9NRX2 175 aaKnown RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 PCTPQ9UKL6 214 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 PSMD13Q9UNM6 376 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 FAM50BQ9Y247 325 aa9.25□□□□□ -0.93
UBE3B-207ENST00000537063 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
UBE3B-207ENST00000537063 TRBV5-4A0A0C4DH59 114 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 NPEPPSL1A6NEC2 478 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 TRIM38O00635 465 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 PPP6CO00743 305 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 PIM1P11309 404 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 PFKLP17858 780 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 ME2P23368 584 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 EEF1DP29692 281 aaKnown RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 PPM1AP35813 382 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 FOXA1P55317 472 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 CLCQ05315 142 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 TXNDC8Q6A555 127 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 OGFOD2Q6N063 350 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 ZFP1Q6P2D0 407 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 GAREM2Q75VX8 874 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 FBXO39Q8N4B4 442 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 AUTS2Q8WXX7 1259 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 NR1H4Q96RI1 486 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 SLC25A23Q9BV35 468 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 NUSAP1Q9BXS6 441 aaKnown RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 MRPL1Q9BYD6 325 aaKnown RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 AKTIPQ9H8T0 292 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 MID1IP1Q9NPA3 183 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 C6orf203Q9P0P8 240 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 FIS1Q9Y3D6 152 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 TYW5A2RUC4 315 aaKnown RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 BBIP1A8MTZ0 92 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 CDC7O00311 574 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 EFCAB14O75071 495 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 SOCS5O75159 536 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 NIPSNAP2O75323 286 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 VPS4BO75351 444 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 ZNF821O75541 412 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 MATN4O95460 622 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 PRAMEF12O95522 483 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 SNRPB2P08579 225 aaKnown RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 CLTBP09497 229 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 CDH13P55290 713 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 MS4A2Q01362 244 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 ART3Q13508 389 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 PTPRRQ15256 657 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 XKR7Q5GH72 579 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 SPOUT1Q5T280 376 aaKnown RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 ATXN7L2Q5T6C5 722 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 TMCO2Q7Z6W1 182 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 FUNDC1Q8IVP5 155 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 SIDT2Q8NBJ9 832 aaKnown RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 ACDQ96AP0 544 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 C2orf49Q9BVC5 232 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-207ENST00000537063 VCX3BQ9H321 246 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 PCDHB1Q9Y5F3 818 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 SUPT3HB4E1H0 165 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 PIP5K1BO14986 540 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 SUPT3HO75486 399 aa9.24□□□□□ -0.93
UBE3B-207ENST00000537063 MT-CO1P00395 513 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms