RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CHCHD6Q9BRQ6 235 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MKRN2Q9H000 416 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CDC14AQ9UNH5 594 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 BAIAP2Q9UQB8 552 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TLR6Q9Y2C9 796 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 AAR2Q9Y312 384 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 RNF11Q9Y3C5 154 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TLL2Q9Y6L7 1015 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 HACD1B0YJ81 288 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 HMBSP08397 361 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 FGFR1P11362 822 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 HGFP14210 728 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 APLP1P51693 650 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 GJA9P57773 515 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ALDH6A1Q02252 535 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ZCCHC8Q6NZY4 707 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 GALNT12Q8IXK2 581 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CADM3Q8N126 398 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ISL2Q96A47 359 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TNIP3Q96KP6 325 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 FAM193BQ96PV7 902 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ACTR3BQ9P1U1 418 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MBD2Q9UBB5 411 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 PDE10AQ9Y233 779 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TRAF6Q9Y4K3 522 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MICAL2O94851 1124 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ARIH2O95376 493 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 NPPAP01160 153 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ANXA6P08133 673 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 NR3C2P08235 984 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 HUNKP57058 714 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 RPS7P62081 194 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CYP4F8P98187 520 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MED22Q15528 200 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CASP12Q6UXS9 341 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 PLCZ1Q86YW0 608 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 SLC44A2Q8IWA5 706 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CLIP4Q8N3C7 705 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 AGBL3Q8NEM8 1001 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 RHOXF1Q8NHV9 184 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CENPIQ92674 756 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 RIPOR3Q96MK2 946 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 KREMEN1Q96MU8 473 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CYP2S1Q96SQ9 504 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TBL1YQ9BQ87 522 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 KATNAL1Q9BW62 490 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ACAT2Q9BWD1 397 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TRIM54Q9BYV2 358 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ITM2CQ9NQX7 267 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 RGS18Q9NS28 235 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ZMYM5Q9UJ78 669 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 SNX7Q9UNH6 387 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 A0A0J9YYE9 177 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 NOBOXO60393 691 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 NPHS1O60500 1241 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 IL18RAPO95256 599 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 PRKAR1AP10644 381 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MTHFD1P11586 935 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TCEA1P23193 301 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ATP5F1P24539 256 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 EPHX2P34913 555 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MTHFRP42898 656 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 RPS5P46782 204 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CXCR4P61073 352 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 BAATQ14032 418 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 FBXO43Q4G163 708 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 GET4Q7L5D6 327 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 NIPA1Q7RTP0 329 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 WDR49Q8IV35 697 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MICALL2Q8IY33 904 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 LSMEM1Q8N8F7 131 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CIDECQ96AQ7 238 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 OTUB1Q96FW1 271 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MFSD14AQ96MC6 490 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF560Q96MR9 790 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 AKIP1Q9NQ31 210 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 UCKL1Q9NWZ5 548 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MORF4L1Q9UBU8 362 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 LEF1Q9UJU2 399 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 VPS4AQ9UN37 437 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TCAF1Q9Y4C2 921 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 BCKDKO14874 412 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 AIREO43918 545 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SPATA31C1P0DKV0 1188 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CSH1P0DML2 217 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CSH2P0DML3 217 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 HSD17B1P14061 328 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GMPRP36959 345 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CLK3P49761 638 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ITGA1P56199 1179 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CDC42P60953 191 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SLC9A5Q14940 896 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 PTRHD1Q6GMV3 140 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 LCN8Q6JVE9 175 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 MRNIPQ6NTE8 343 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 EIF3MQ7L2H7 374 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 EPHX4Q8IUS5 362 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 PHC2Q8IXK0 858 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ELMOD2Q8IZ81 293 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SCML4Q8N228 414 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms