RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 A0A1W2PR77 199 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 hDV102S1A0JD36 115 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 OR6C75A6NL08 312 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 EIF4E1BA6NMX2 242 aaKnown RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 UBE2CO00762 179 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 MAP2K7O14733 419 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 SMAD9O15198 467 aaKnown RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 RSL1D1O76021 490 aaKnown RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 BCL10O95999 233 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 AFPP02771 609 aaKnown RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 C21orf33P30042 268 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 MXI1P50539 228 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 C21orf58P58505 322 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 PPP2R2BQ00005 443 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 GPS2Q13227 327 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 MAD2L1Q13257 205 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 GRAPQ13588 217 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 BAATQ14032 418 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 CTF1Q16619 201 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 PPP6R3Q5H9R7 873 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 C9orf152Q5JTZ5 239 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 C1orf141Q5JVX7 400 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 DCST1Q5T197 706 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 ERMARDQ5T6L9 678 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 KRT79Q5XKE5 535 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 MCEMP1Q8IX19 187 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 TRPC4APQ8TEL6 797 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 ZNF622Q969S3 477 aaKnown RBP eCLIP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 CDRT15Q96T59 188 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 DDOQ99489 341 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 CCDC106Q9BWC9 280 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 RTN4RQ9BZR6 473 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 OR10A4Q9H209 315 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 C17orf75Q9HAS0 396 aa5.4□□□□□ -1.54
PRKDC-208ENST00000536710 UBA2Q9UBT2 640 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 DBNLQ9UJU6 430 aaKnown RBP5.4□□□□□ -1.54
PRKDC-208ENST00000536710 ARHGEF40Q8TER5 1519 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 LNP1A1A4G5 178 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 INAFM1C9JVW0 142 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 H7C0S8 307 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 CLGNO14967 610 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 SPINT2O43291 252 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 SOX30O94993 753 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 ZWINTO95229 277 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 GGPS1O95749 300 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 TPOP07202 933 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 HOXB2P14652 356 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 GJA1P17302 382 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 EEF1DP29692 281 aaKnown RBP5.39□□□□□ -1.55
PRKDC-208ENST00000536710 KCNJ4P48050 445 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 RFX2P48378 723 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 PPP5CP53041 499 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 POU5F1Q01860 360 aaKnown RBP5.39□□□□□ -1.55
PRKDC-208ENST00000536710 ROR2Q01974 943 aaKnown RBP5.39□□□□□ -1.55
PRKDC-208ENST00000536710 KYNUQ16719 465 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 OR14A16Q8NHC5 309 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 PGAP3Q96FM1 320 aaPredicted RBP5.39□□□□□ -1.55
PRKDC-208ENST00000536710 DGAT2Q96PD7 388 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 SMC6Q96SB8 1091 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 TMEM79Q9BSE2 394 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 SLC29A3Q9BZD2 475 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 ZCCHC17Q9NP64 241 aaKnown RBP5.39□□□□□ -1.55
PRKDC-208ENST00000536710 ZNF148Q9UQR1 794 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 PCDHGA5Q9Y5G8 931 aa5.39□□□□□ -1.55
PRKDC-208ENST00000536710 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.39□□□□□ -1.55
PRKDC-208ENST00000536710 ATXN2Q99700 1313 aaKnown RBP5.39□□□□□ -1.55
PRKDC-208ENST00000536710 LOC102723996A0A087X1L8 192 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 A0A1W2PRQ8 180 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 SOCS6O14544 535 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 HS3ST1O14792 307 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 PLRG1O43660 514 aaKnown RBP5.38□□□□□ -1.55
PRKDC-208ENST00000536710 PLPP2O43688 288 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 NDUFS7O75251 213 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 SERPINI2O75830 405 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 PSMD10O75832 226 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 GH2P01242 217 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 MYBL1P10243 752 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 MMP14P50281 582 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 ARSEP51690 589 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 MRPS21P82921 87 aaKnown RBP5.38□□□□□ -1.55
PRKDC-208ENST00000536710 PLCB4Q15147 1175 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 LETM2Q2VYF4 491 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 NSUN5P2Q63ZY6 315 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 DPY19L2P1Q6NXN4 242 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 WDR73Q6P4I2 378 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 DENND5BQ6ZUT9 1274 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 PLPPR4Q7Z2D5 763 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 BEST3Q8N1M1 668 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 OR6J1Q8NGC5 347 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 HMGCLL1Q8TB92 370 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 DUSP19Q8WTR2 217 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 LPGAT1Q92604 370 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 SECISBP2LQ93073 1101 aaKnown RBP5.38□□□□□ -1.55
PRKDC-208ENST00000536710 RAD21L1Q9H4I0 556 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 MAGIXQ9H6Y5 334 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 CHMP1AQ9HD42 196 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-208ENST00000536710 HIF1ANQ9NWT6 349 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 TAS2R14Q9NYV8 317 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 DNAJB4Q9UDY4 337 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 HACL1Q9UJ83 578 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms