RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 FAM83DQ9H4H8 585 aa13.03□□□□□ -0.32
RTN3-207ENST00000536011 ZNHIT2Q9UHR6 403 aa13.03□□□□□ -0.32
RTN3-207ENST00000536011 HEY1Q9Y5J3 304 aa13.03□□□□□ -0.32
RTN3-207ENST00000536011 SCN8AQ9UQD0 1980 aa13.02□□□□□ -0.32
RTN3-207ENST00000536011 IGHV5-10-1A0A0J9YXX1 117 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 GPR89AB7ZAQ6 455 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.02□□□□□ -0.33
RTN3-207ENST00000536011 STMND1H3BQB6 276 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 KCNK1O00180 336 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 INPP4BO15327 924 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 DUX1O43812 170 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 PRLP01236 227 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 ITGB2P05107 769 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 GPR89BP0CG08 455 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 CD1CP29017 333 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 CSTF2P33240 577 aaKnown RBP eCLIP13.02□□□□□ -0.33
RTN3-207ENST00000536011 LIMK2P53671 638 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 NIPAL4Q0D2K0 466 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 AP1B1Q10567 949 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 C16orf72Q14CZ0 275 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 ASTE1Q2TB18 679 aaPredicted RBP13.02□□□□□ -0.33
RTN3-207ENST00000536011 HENMT1Q5T8I9 393 aaKnown RBP13.02□□□□□ -0.33
RTN3-207ENST00000536011 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 RFLNAQ6ZTI6 216 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 BZW1Q7L1Q6 419 aaKnown RBP13.02□□□□□ -0.33
RTN3-207ENST00000536011 TMPRSS9Q7Z410 1059 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 PHYKPLQ8IUZ5 450 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 SFRP1Q8N474 314 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 SLC35G2Q8TBE7 412 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 PTCD2Q8WV60 388 aaKnown RBP13.02□□□□□ -0.33
RTN3-207ENST00000536011 PATE1Q8WXA2 126 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 RAPGEF5Q92565 580 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 MED8Q96G25 268 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 CCDC74BQ96LY2 380 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 TAAR9Q96RI9 348 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 SRPK1Q96SB4 655 aaKnown RBP13.02□□□□□ -0.33
RTN3-207ENST00000536011 SLC38A3Q99624 504 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 HERPUD2Q9BSE4 406 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 ASPSCR1Q9BZE9 553 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 ABHD10Q9NUJ1 306 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 DDX56Q9NY93 547 aaKnown RBP13.02□□□□□ -0.33
RTN3-207ENST00000536011 PIEZO2Q9H5I5 2752 aa13.02□□□□□ -0.33
RTN3-207ENST00000536011 COL6A6A6NMZ7 2263 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 IGHV1OR21-1A0A087WYE8 117 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 A0A0U1RQS6 177 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 C9orf172C9J069 976 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 MTA2O94776 668 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 KRT1P04264 644 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 ETV5P41161 510 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 SLC1A1P43005 524 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 TNNT3P45378 269 aaPredicted RBP13.01□□□□□ -0.33
RTN3-207ENST00000536011 ATP1A2P50993 1020 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 RAB15P59190 212 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 HHEXQ03014 270 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 SLC10A2Q12908 348 aaPredicted RBP13.01□□□□□ -0.33
RTN3-207ENST00000536011 SLC14A2Q15849 920 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 QPCTQ16769 361 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 ZNF569Q5MCW4 686 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 KIAA1614Q5VZ46 1190 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 PDPK2PQ6A1A2 396 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 SLC9A4Q6AI14 798 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 CCDC70Q6NSX1 233 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 NT5DC3Q86UY8 548 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 CPNE8Q86YQ8 564 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 CNGA4Q8IV77 575 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 PLD5Q8N7P1 536 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 SLC37A2Q8TED4 501 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 SMIM14Q96QK8 99 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 AGAP2Q99490 1192 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 ZSCAN5AQ9BUG6 496 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 DDA1Q9BW61 102 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.01□□□□□ -0.33
RTN3-207ENST00000536011 CARD9Q9H257 536 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 EPB41L1Q9H4G0 881 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 ZFYVE1Q9HBF4 777 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 FOXJ2Q9P0K8 574 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 PCDHGA3Q9Y5H0 932 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 ST14Q9Y5Y6 855 aa13.01□□□□□ -0.33
RTN3-207ENST00000536011 KIR2DS5A0A0G2JLQ3 304 aa13□□□□□ -0.33
RTN3-207ENST00000536011 A0A0G2JNG1 304 aa13□□□□□ -0.33
RTN3-207ENST00000536011 OR5K4A6NMS3 321 aa13□□□□□ -0.33
RTN3-207ENST00000536011 KIR2DS3K7RE56 304 aa13□□□□□ -0.33
RTN3-207ENST00000536011 AGRPO00253 132 aa13□□□□□ -0.33
RTN3-207ENST00000536011 PPM1DO15297 605 aa13□□□□□ -0.33
RTN3-207ENST00000536011 EFSO43281 561 aa13□□□□□ -0.33
RTN3-207ENST00000536011 MFAP3LO75121 409 aa13□□□□□ -0.33
RTN3-207ENST00000536011 ATP1A1P05023 1023 aaKnown RBP13□□□□□ -0.33
RTN3-207ENST00000536011 MMP2P08253 660 aa13□□□□□ -0.33
RTN3-207ENST00000536011 THRAP10827 490 aa13□□□□□ -0.33
RTN3-207ENST00000536011 PLA2G2AP14555 144 aa13□□□□□ -0.33
RTN3-207ENST00000536011 DCDC1P59894 354 aa13□□□□□ -0.33
RTN3-207ENST00000536011 ZBTB17Q13105 803 aa13□□□□□ -0.33
RTN3-207ENST00000536011 TFDP2Q14188 446 aa13□□□□□ -0.33
RTN3-207ENST00000536011 LY6DQ14210 128 aa13□□□□□ -0.33
RTN3-207ENST00000536011 GALNT3Q14435 633 aa13□□□□□ -0.33
RTN3-207ENST00000536011 IHHQ14623 411 aa13□□□□□ -0.33
RTN3-207ENST00000536011 KIR2DS5Q14953 304 aa13□□□□□ -0.33
RTN3-207ENST00000536011 TGIF1Q15583 401 aa13□□□□□ -0.33
RTN3-207ENST00000536011 TMEM71Q6P5X7 295 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms