RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TRIM48Q8IWZ4 208 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CBARPQ8N350 705 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 BMPERQ8N8U9 685 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CCHCR1Q8TD31 782 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PIH1D2Q8WWB5 315 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 RIOK2Q9BVS4 552 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 RMI1Q9H9A7 625 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 FBXO8Q9NRD0 319 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ETNK2Q9NVF9 386 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PKD2L2Q9NZM6 624 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 KCNK6Q9Y257 313 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PPIL1Q9Y3C6 166 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PRKAB1Q9Y478 270 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 KCTD3Q9Y597 815 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 KIR2DS5A0A0G2JLQ3 304 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 A0A0G2JNG1 304 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 A0A0U1RQS6 177 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 OR5K4A6NMS3 321 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 KIR2DS3K7RE56 304 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 MTA2O94776 668 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ATP1A1P05023 1023 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PDHA1P08559 390 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 F3P13726 295 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CES1P23141 567 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ZNF165P49910 485 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 STC1P52823 247 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PTSQ03393 145 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 KLHL30Q0D2K2 578 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PIGHQ14442 188 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 KIR2DS5Q14953 304 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 IGFBP7Q16270 282 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 LYSMD3Q7Z3D4 306 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 LPCAT1Q8NF37 534 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 STAMBPL1Q96FJ0 436 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ABHD17AQ96GS6 310 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 COX14Q96I36 57 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 AGAP2Q99490 1192 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ULBP3Q9BZM4 244 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 NAT10Q9H0A0 1025 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 OSGEPL1Q9H4B0 414 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PDP2Q9P2J9 529 aa12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TMEM184BQ9Y519 407 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-207ENST00000535958 C1orf232A0A0U1RR37 186 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PRR19A6NJB7 356 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 MKRN2OSH3BPM6 223 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 RARAP10276 462 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 GP1BBP13224 206 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 IL1R2P27930 398 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 OAS2P29728 719 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 DLSTP36957 453 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 STAT5AP42229 794 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 KLRB1Q12918 225 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 MAP7Q14244 749 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TDRD12Q587J7 1177 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ANKRD20A8PQ5CZ79 823 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CYB5D1Q6P9G0 228 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 IYDQ6PHW0 289 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 RFLNAQ6ZTI6 216 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 RASGRP3Q8IV61 690 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 RAVER1Q8IY67 606 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 FAM26EQ8N5C1 309 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 AOPEPQ8N6M6 819 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TEX19Q8NA77 164 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TEKT4Q8WW24 435 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SYT11Q9BT88 431 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TDRD1Q9BXT4 1180 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PCDH18Q9HCL0 1135 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 APMAPQ9HDC9 416 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 RCOR3Q9P2K3 495 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TBC1D29Q9UFV1 150 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CHKBQ9Y259 395 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 RPS6KL1Q9Y6S9 549 aa12.84□□□□□ -0.35
TNFRSF1A-207ENST00000535958 LILRA5A6NI73 299 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 LRRC10BA6NIK2 292 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GRID2O43424 1007 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 FZD6O60353 706 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 DNAJC6O75061 913 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RASSF9O75901 435 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CLDN7O95471 211 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 EML2O95834 649 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 VIPP01282 170 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 AMD1P17707 334 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GJC1P36383 396 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GARSP41250 739 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RPL26P61254 145 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 DSC2Q02487 901 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 HADHQ16836 314 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 INSCQ1MX18 579 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CRTC2Q53ET0 693 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZNF569Q5MCW4 686 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 C6orf15Q6UXA7 325 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TIPARPQ7Z3E1 657 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZNF571Q7Z3V5 609 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TEX26Q8N6G2 289 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZNF830Q96NB3 372 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TBC1D10AQ9BXI6 508 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CARD9Q9H257 536 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 FAM83DQ9H4H8 585 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PCDH9Q9HC56 1237 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms