RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ZNF66Q6ZN08 573 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 TMTC3Q6ZXV5 915 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 R3HCC1LQ7Z5L2 792 aaKnown RBP3.41□□□□□ -1.86
SNHG1-202ENST00000535689 TBC1D26Q86UD7 250 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 FAM160B2Q86V87 743 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 HACE1Q8IYU2 909 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 TMTC2Q8N394 836 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 GDPD5Q8WTR4 605 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 UCMAQ8WVF2 138 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 SMG7Q92540 1137 aaKnown RBP3.41□□□□□ -1.86
SNHG1-202ENST00000535689 RRP36Q96EU6 259 aaKnown RBP3.41□□□□□ -1.86
SNHG1-202ENST00000535689 MAP7D2Q96T17 732 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 SF3B5Q9BWJ5 86 aaKnown RBP3.41□□□□□ -1.86
SNHG1-202ENST00000535689 QTRT1Q9BXR0 403 aaKnown RBP3.41□□□□□ -1.86
SNHG1-202ENST00000535689 SLC29A3Q9BZD2 475 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 PORCNQ9H237 461 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 SEMA4BQ9NPR2 832 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-202ENST00000535689 ORC3Q9UBD5 711 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-202ENST00000535689 FBXO4Q9UKT5 387 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 SARDHQ9UL12 918 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 FAM96BQ9Y3D0 163 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 LYVE1Q9Y5Y7 322 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 TRIOO75962 3097 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 CDH23Q9H251 3354 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 GAKO14976 1311 aa3.41□□□□□ -1.86
SNHG1-202ENST00000535689 MYH1P12882 1939 aa3.4□□□□□ -1.86
SNHG1-202ENST00000535689 XIRP2A4UGR9 3374 aa3.4□□□□□ -1.86
SNHG1-202ENST00000535689 TRBV5-7A0A0A0MS05 114 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 IGLV5-39A0A0G2JS06 123 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 PPEF2O14830 753 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 TSPAN9O75954 239 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 NDUFB4O95168 129 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 GALTP07902 379 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 TFPIP10646 304 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 PEPDP12955 493 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 CSF2RAP15509 400 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ARSBP15848 533 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 TMEM11P17152 192 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ABCD3P28288 659 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 CHATP28329 748 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ABCG1P45844 678 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 CCR9P51686 369 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 GEMIN4P57678 1058 aaKnown RBP3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ZP1P60852 638 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 SSBP2P81877 361 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-202ENST00000535689 LRMPQ12912 555 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 MTX1Q13505 466 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 KCTD2Q14681 263 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 SHBQ15464 509 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 TCTN1Q2MV58 587 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ENTPD8Q5MY95 495 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 SH2D4BQ5SQS7 431 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ZNF626Q68DY1 528 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 FAM83HQ6ZRV2 1179 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-202ENST00000535689 SLC46A3Q7Z3Q1 461 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 RNF144BQ7Z419 303 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 MON1AQ86VX9 555 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 DENND6AQ8IWF6 608 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 RBFAQ8N0V3 343 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 TMEM217Q8N7C4 229 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 GABPB2Q8TAK5 448 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-202ENST00000535689 MAGEC3Q8TD91 643 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ATOH1Q92858 354 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ZC3HAV1LQ96H79 300 aaKnown RBP3.4□□□□□ -1.87
SNHG1-202ENST00000535689 VCPIP1Q96JH7 1222 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 C12orf42Q96LP6 360 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 TMEM68Q96MH6 324 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 HERC2P3Q9BVR0 1158 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 SH2D4AQ9H788 454 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 SYNCQ9H7C4 482 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 BRF2Q9HAW0 419 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ZNF304Q9HCX3 659 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 KRCC1Q9NPI7 259 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-202ENST00000535689 SMYD2Q9NRG4 433 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 KRT84Q9NSB2 600 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 TMEM184CQ9NVA4 438 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 ANKRD10Q9NXR5 420 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 DLGAP2Q9P1A6 1054 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 HAO1Q9UJM8 370 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 TBX21Q9UL17 535 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 A4GNTQ9UNA3 340 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 MTMR6Q9Y217 621 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 FRMD4BQ9Y2L6 1034 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 MYO10Q9HD67 2058 aa3.4□□□□□ -1.87
SNHG1-202ENST00000535689 PDS5AQ29RF7 1337 aaKnown RBP3.4□□□□□ -1.87
SNHG1-202ENST00000535689 CHD7Q9P2D1 2997 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 USP34Q70CQ2 3546 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 MYH8P13535 1937 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ZNF318Q5VUA4 2279 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 RPS10-NUDT3A0A1W2PQS6 291 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 WIPF3A6NGB9 483 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 PROB1E7EW31 1015 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 STMND1H3BQB6 276 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 HSPB6O14558 160 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 SPTLC2O15270 562 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 MT-CYBP00156 380 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 CYP1A2P05177 515 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ASGR1P07306 291 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ACADMP11310 421 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 LYL1P12980 280 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms