RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 RNASEH2BQ5TBB1 312 aaKnown RBP20.39■□□□□ 0.85
CHFR-209ENST00000535181 PIP4P1Q86T03 277 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 PHYKPLQ8IUZ5 450 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 PPIL6Q8IXY8 311 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 OR13C4Q8NGS5 318 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 KIF18AQ8NI77 898 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 OR1E3Q8WZA6 343 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 PDXPQ96GD0 296 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 KRT12Q99456 494 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 SLC13A1Q9BZW2 595 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 XAB2Q9HCS7 855 aaKnown RBP20.39■□□□□ 0.85
CHFR-209ENST00000535181 BFARQ9NZS9 450 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 SPASTQ9UBP0 616 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 APOBEC3BQ9UH17 382 aaKnown RBP20.39■□□□□ 0.85
CHFR-209ENST00000535181 CSNK1G3Q9Y6M4 447 aa20.39■□□□□ 0.85
CHFR-209ENST00000535181 PRSS38A1L453 326 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 GPR89AB7ZAQ6 455 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 DNALI1O14645 258 aaPredicted RBP20.38■□□□□ 0.85
CHFR-209ENST00000535181 INPP4BO15327 924 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 GPR89BP0CG08 455 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 CSRP1P21291 193 aaKnown RBP20.38■□□□□ 0.85
CHFR-209ENST00000535181 IVDP26440 423 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 GRK6P43250 576 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 XIAPP98170 497 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 BNIP3Q12983 259 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 SEPT6Q14141 434 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 PTPRCAPQ14761 206 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 SKIDA1Q1XH10 827 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 ATP13A5Q4VNC0 1218 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 ZNF542PQ5EBM4 170 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 ANKRD22Q5VYY1 191 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 FAM151BQ6UXP7 276 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 HOOK3Q86VS8 718 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 NAXDQ8IW45 347 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 SDR16C5Q8N3Y7 309 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 FSTL5Q8N475 847 aaPredicted RBP20.38■□□□□ 0.85
CHFR-209ENST00000535181 ZNF548Q8NEK5 533 aaPredicted RBP20.38■□□□□ 0.85
CHFR-209ENST00000535181 PTCD2Q8WV60 388 aaKnown RBP20.38■□□□□ 0.85
CHFR-209ENST00000535181 ZNF592Q92610 1267 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 RMI1Q9H9A7 625 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 FKBPLQ9UIM3 349 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 TCAF1Q9Y4C2 921 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 MRFAP1Q9Y605 127 aa20.38■□□□□ 0.85
CHFR-209ENST00000535181 COL5A1P20908 1838 aaPredicted RBP20.37■□□□□ 0.85
CHFR-209ENST00000535181 FAM187AA6NFU0 413 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 AGAP14A8MT82 685 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 SMAPO00193 183 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 TTI1O43156 1089 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 SRP72O76094 671 aaKnown RBP20.37■□□□□ 0.85
CHFR-209ENST00000535181 PRAMEF1O95521 474 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 TNFP01375 233 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 ACVR1Q04771 509 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 CHRNA6Q15825 494 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 PCID2Q5JVF3 399 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 MAATS1Q7Z4T9 603 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 HID1Q8IV36 788 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 RBFAQ8N0V3 343 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 SLC25A45Q8N413 288 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 PPHLN1Q8NEY8 458 aaKnown RBP20.37■□□□□ 0.85
CHFR-209ENST00000535181 TSACCQ96A04 125 aaPredicted RBP20.37■□□□□ 0.85
CHFR-209ENST00000535181 DNAJC1Q96KC8 554 aaKnown RBP20.37■□□□□ 0.85
CHFR-209ENST00000535181 LRRC61Q9BV99 259 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 MRM3Q9HC36 420 aaKnown RBP20.37■□□□□ 0.85
CHFR-209ENST00000535181 TRIM39Q9HCM9 518 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 TMPRSS11EQ9UL52 423 aa20.37■□□□□ 0.85
CHFR-209ENST00000535181 BPTFQ12830 3046 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 NEMP2A6NFY4 417 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 SCAMP1O15126 338 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 AQP9O43315 295 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 SDC3O75056 442 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 SLC25A14O95258 325 aaPredicted RBP20.36■□□□□ 0.85
CHFR-209ENST00000535181 MAGEA3P43357 314 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 SESN2P58004 480 aaPredicted RBP20.36■□□□□ 0.85
CHFR-209ENST00000535181 C2orf54Q08AI8 447 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 NFATC2Q13469 925 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 PEX6Q13608 980 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 ELOCQ15369 112 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 TSTD2Q5T7W7 516 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 KCTD16Q68DU8 428 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 TRIM74Q86UV6 250 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 CAND1Q86VP6 1230 aaKnown RBP20.36■□□□□ 0.85
CHFR-209ENST00000535181 GATAD2AQ86YP4 633 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 DDHD1Q8NEL9 900 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 BAHD1Q8TBE0 780 aaPredicted RBP20.36■□□□□ 0.85
CHFR-209ENST00000535181 ZNF398Q8TD17 642 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 CDKN2AIPNLQ96HQ2 116 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 SERPINB12Q96P63 405 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 TCEAL2Q9H3H9 227 aaPredicted RBP20.36■□□□□ 0.85
CHFR-209ENST00000535181 CYP4F12Q9HCS2 524 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 MRPL40Q9NQ50 206 aaKnown RBP20.36■□□□□ 0.85
CHFR-209ENST00000535181 TRNAU1APQ9NX07 287 aaKnown RBP20.36■□□□□ 0.85
CHFR-209ENST00000535181 PCOLCE2Q9UKZ9 415 aa20.36■□□□□ 0.85
CHFR-209ENST00000535181 OAS3Q9Y6K5 1087 aaKnown RBP20.36■□□□□ 0.85
CHFR-209ENST00000535181 TDRD6O60522 2096 aaKnown RBP20.35■□□□□ 0.85
CHFR-209ENST00000535181 TPP1O14773 563 aa20.35■□□□□ 0.85
CHFR-209ENST00000535181 NDC80O14777 642 aa20.35■□□□□ 0.85
CHFR-209ENST00000535181 VEGFDO43915 354 aa20.35■□□□□ 0.85
CHFR-209ENST00000535181 SH3BP5O60239 455 aa20.35■□□□□ 0.85
CHFR-209ENST00000535181 CBFA2T3O75081 653 aa20.35■□□□□ 0.85
CHFR-209ENST00000535181 FUCA1P04066 466 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms