RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 RXRGP48443 463 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 ATXN3P54252 364 aaPredicted RBP13.03□□□□□ -0.32
TMEM258-202ENST00000535042 SARNPP82979 210 aaKnown RBP13.03□□□□□ -0.32
TMEM258-202ENST00000535042 PDE1BQ01064 536 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 SLC7A5Q01650 507 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 BNIP3Q12983 259 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 PTK2BQ14289 1009 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 KHDC1Q4VXA5 237 aaKnown RBP13.03□□□□□ -0.32
TMEM258-202ENST00000535042 FNBP1LQ5T0N5 605 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 STPG1Q5TH74 334 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 ZDHHC20Q5W0Z9 365 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 DOK6Q6PKX4 331 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 PCGF5Q86SE9 256 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 CTAGE6Q86UF2 777 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 HOOK3Q86VS8 718 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 PARGQ86W56 976 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 CTAGE4Q8IX94 777 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 RBFAQ8N0V3 343 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 LRRN4CLQ8ND94 238 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 MNS1Q8NEH6 495 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 OR56A4Q8NGH8 313 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 OR13J1Q8NGT2 312 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 ZNF398Q8TD17 642 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 BTN2A2Q8WVV5 523 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 GLYATL1Q969I3 302 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 PDXPQ96GD0 296 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 SNF8Q96H20 258 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 SIGLEC10Q96LC7 697 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 C19orf43Q9BQ61 176 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 TRIM56Q9BRZ2 755 aaKnown RBP13.03□□□□□ -0.32
TMEM258-202ENST00000535042 IL22Q9GZX6 179 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 XAB2Q9HCS7 855 aaKnown RBP13.03□□□□□ -0.32
TMEM258-202ENST00000535042 TMEM9BQ9NQ34 198 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 MRPL40Q9NQ50 206 aaKnown RBP13.03□□□□□ -0.32
TMEM258-202ENST00000535042 DNAAF2Q9NVR5 837 aaKnown RBP13.03□□□□□ -0.32
TMEM258-202ENST00000535042 DNAJC28Q9NX36 388 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 GRHL1Q9NZI5 618 aa13.03□□□□□ -0.32
TMEM258-202ENST00000535042 CCDC162PA2VCL2 907 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 OR51F1A6NGY5 319 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 H7C0S8 307 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 AP3B1O00203 1094 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 SDC3O75056 442 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 MTX2O75431 263 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 BANF1O75531 89 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 SRP72O76094 671 aaKnown RBP13.02□□□□□ -0.33
TMEM258-202ENST00000535042 PRAMEF1O95521 474 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 CSF2P04141 144 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 PRSS56P0CW18 603 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 NME1P15531 152 aaKnown RBP13.02□□□□□ -0.33
TMEM258-202ENST00000535042 HTR1BP28222 390 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 NMBRP28336 390 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 MC4RP32245 332 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 HADHAP40939 763 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 PI4KAP42356 2102 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 CDKN1CP49918 316 aaPredicted RBP13.02□□□□□ -0.33
TMEM258-202ENST00000535042 SRP54P61011 504 aaKnown RBP13.02□□□□□ -0.33
TMEM258-202ENST00000535042 ACVR1Q04771 509 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 MORF4L2Q15014 288 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 MSS51Q4VC12 460 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 PDPK2PQ6A1A2 396 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 C8orf74Q6P047 294 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 CES3Q6UWW8 571 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 KANSL1Q7Z3B3 1105 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 RD3Q7Z3Z2 195 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 GATAD2AQ86YP4 633 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 PHACTR4Q8IZ21 702 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 CEP112Q8N8E3 955 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 PPHLN1Q8NEY8 458 aaKnown RBP13.02□□□□□ -0.33
TMEM258-202ENST00000535042 VPS35Q96QK1 796 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 KIFC1Q9BW19 673 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 FAM96AQ9H5X1 160 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 L2HGDHQ9H9P8 463 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 TM7SF3Q9NS93 570 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 TREX1Q9NSU2 369 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 UCKL1Q9NWZ5 548 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 KLQ9UEF7 1012 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 ANAPC5Q9UJX4 755 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 APPL1Q9UKG1 709 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 RIMKLBQ9ULI2 386 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 SOX13Q9UN79 622 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 SLC17A4Q9Y2C5 497 aa13.02□□□□□ -0.33
TMEM258-202ENST00000535042 PCYT1BQ9Y5K3 369 aaPredicted RBP13.02□□□□□ -0.33
TMEM258-202ENST00000535042 RIF1Q5UIP0 2472 aaKnown RBP13.02□□□□□ -0.33
TMEM258-202ENST00000535042 MYLKQ15746 1914 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 ADAMTS9Q9P2N4 1935 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 SCN8AQ9UQD0 1980 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 CACNA1EQ15878 2313 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 SDR42E2A6NKP2 422 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 AGAP14A8MT82 685 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
TMEM258-202ENST00000535042 TNFRSF10CO14798 259 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 DFNA5O60443 496 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 PIAS2O75928 621 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 SLC25A14O95258 325 aaPredicted RBP13.01□□□□□ -0.33
TMEM258-202ENST00000535042 CD59P13987 128 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 JUNDP17535 347 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 KELP23276 732 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 EPHA8P29322 1005 aaPredicted RBP13.01□□□□□ -0.33
TMEM258-202ENST00000535042 CCT8P50990 548 aa13.01□□□□□ -0.33
TMEM258-202ENST00000535042 HK3P52790 923 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms