RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 RALGPS1Q5JS13 557 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 SIRPB2Q5JXA9 342 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 XKR5Q6UX68 686 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 RBM44Q6ZP01 1051 aaKnown RBP9.56□□□□□ -0.88
SSBP3-215ENST00000533946 PRUNE1Q86TP1 453 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 NT5DC3Q86UY8 548 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 GKN2Q86XP6 184 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 CCNJLQ8IV13 435 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 KATNAL2Q8IYT4 538 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 BBS5Q8N3I7 341 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 TTC30BQ8N4P2 665 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 TAB3Q8N5C8 712 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-215ENST00000533946 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-215ENST00000533946 DEPDC7Q96QD5 511 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 PANX2Q96RD6 677 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 LYSMD1Q96S90 227 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 MAK16Q9BXY0 300 aaKnown RBP9.56□□□□□ -0.88
SSBP3-215ENST00000533946 UGT1A7Q9HAW7 530 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 UGT1A10Q9HAW8 530 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 UGT1A8Q9HAW9 530 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 EPB41L5Q9HCM4 733 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 ZNHIT2Q9UHR6 403 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF711Q9Y462 761 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 ADGRG1Q9Y653 693 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 BAHCC1Q9P281 2608 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 PSMD11O00231 422 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 TOR1BO14657 336 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 DDX3YO15523 660 aaKnown RBP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 PSTPIP1O43586 416 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 TNFSF15O95150 251 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 ASMTLO95671 621 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 FTCDO95954 541 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 IVLP07476 585 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 PRSS56P0CW18 603 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 ACP5P13686 325 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 MX2P20592 715 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 ALDH4A1P30038 563 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 ACTR1BP42025 376 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 SLC1A1P43005 524 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 LSSP48449 732 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 BLKP51451 505 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 ACTR1AP61163 376 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 OTUD4Q01804 1114 aaKnown RBP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 CDK18Q07002 472 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 MSLNQ13421 630 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 LVRNQ6Q4G3 990 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 CHST15Q7LFX5 561 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 TMC3Q7Z5M5 1100 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 ADGRG6Q86SQ4 1221 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 DAAM2Q86T65 1068 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF547Q8IVP9 402 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 SLITRK4Q8IW52 837 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 CACTIN-AS1Q8N1I8 211 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 SNIP1Q8TAD8 396 aaKnown RBP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 ACTL9Q8TC94 416 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 SLC37A2Q8TED4 501 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 TFB1MQ8WVM0 346 aaKnown RBP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 JPH3Q8WXH2 748 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 FGF11Q92914 225 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 SLC46A1Q96NT5 459 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 QKIQ96PU8 341 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 OR2AG1Q9H205 316 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 FAM83DQ9H4H8 585 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 PRORYQ9H606 182 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 POLR1BQ9H9Y6 1135 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 PRDM8Q9NQV8 689 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 PIH1D1Q9NWS0 290 aaKnown RBP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 DDX56Q9NY93 547 aaKnown RBP9.55□□□□□ -0.88
SSBP3-215ENST00000533946 FOXJ2Q9P0K8 574 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 CAPN6Q9Y6Q1 641 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 SDK2Q58EX2 2172 aa9.55□□□□□ -0.88
SSBP3-215ENST00000533946 A0A0A6YYK5 440 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-215ENST00000533946 LOC285095A0A1B0GVY8 99 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 MACROD2A1Z1Q3 448 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 A6NCN8 305 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 CDRT15L2A8MXV6 281 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 PJA2O43164 708 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 SNX2O60749 519 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 ZRANB2O95218 330 aaKnown RBP eCLIP9.54□□□□□ -0.888e-7■□□□□ 11.3
SSBP3-215ENST00000533946 GLB1P16278 677 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 CTNNA1P35221 906 aaKnown RBP9.54□□□□□ -0.88
SSBP3-215ENST00000533946 ZFP36L1Q07352 338 aaKnown RBP9.54□□□□□ -0.88
SSBP3-215ENST00000533946 COL9A2Q14055 689 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-215ENST00000533946 SPIDRQ14159 915 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 CHRNA6Q15825 494 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 ATP13A5Q4VNC0 1218 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 TFDP3Q5H9I0 405 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 C11orf63Q6NUN7 778 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 CRTC3Q6UUV7 619 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 BBS12Q6ZW61 710 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF765Q7L2R6 523 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 ZFAND4Q86XD8 727 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 CCDC170Q8IYT3 715 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 RCOR2Q8IZ40 523 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 IPMKQ8NFU5 416 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 CCDC110Q8TBZ0 833 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 OR2M4Q96R27 311 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 GFM1Q96RP9 751 aaKnown RBP9.54□□□□□ -0.88
SSBP3-215ENST00000533946 TBC1D10AQ9BXI6 508 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 ZFYVE1Q9HBF4 777 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms