RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 COPS5Q92905 334 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 MRPL45Q9BRJ2 306 aaKnown RBP6.99□□□□□ -1.29
CTNND1-236ENST00000533667 TTYH3Q9C0H2 523 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 FAM105AQ9NUU6 356 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 TBCCD1Q9NVR7 557 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 ING3Q9NXR8 418 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 NDOR1Q9UHB4 597 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 SLC27A6Q9Y2P4 619 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 POLR3HQ9Y535 204 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-236ENST00000533667 IRAK3Q9Y616 596 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 BUD23O43709 281 aaKnown RBP6.99□□□□□ -1.29
CTNND1-236ENST00000533667 NPHS1O60500 1241 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 SIN3BO75182 1162 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 SLC35G4P0C7Q5 338 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 CTSEP14091 401 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 HTR1BP28222 390 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 HOXC8P31273 242 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 CDH5P33151 784 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-236ENST00000533667 CPSF6Q16630 551 aaKnown RBP eCLIP6.99□□□□□ -1.29
CTNND1-236ENST00000533667 FAM180AQ6UWF9 173 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 PTCHD4Q6ZW05 846 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 DSELQ8IZU8 1212 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 SVOPLQ8N434 492 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 GRIN3AQ8TCU5 1115 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 RERGQ96A58 199 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-236ENST00000533667 CPXM1Q96SM3 734 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 NUSAP1Q9BXS6 441 aaKnown RBP6.99□□□□□ -1.29
CTNND1-236ENST00000533667 LRTM1Q9HBL6 345 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 TMPRSS4Q9NRS4 437 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 DNAJC11Q9NVH1 559 aa6.99□□□□□ -1.29
CTNND1-236ENST00000533667 LRRC14BA6NHZ5 514 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 NADKO95544 446 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 CHRNGP07510 517 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 TCF4P15884 667 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 MPSTP25325 297 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 L1CAMP32004 1257 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ICAM3P32942 547 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 FAUP35544 74 aaKnown RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 KIR3DL1P43629 444 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 CACNG1Q06432 222 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 LAPTM5Q13571 262 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 BLMHQ13867 455 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SLC1A5Q15758 541 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 CYP1B1Q16678 543 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ATP13A5Q4VNC0 1218 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 GLYATQ6IB77 296 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 UNC5BQ8IZJ1 945 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 OR4A15Q8NGL6 344 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SLC9A7Q96T83 725 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 NPAS2Q99743 824 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 LMAN2LQ9H0V9 348 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 AGO3Q9H9G7 860 aaKnown RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SMPD3Q9NY59 655 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 HMGXB4Q9UGU5 601 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 MRPS33Q9Y291 106 aaKnown RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 TELO2Q9Y4R8 837 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 HES2Q9Y543 173 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ZNF780BQ9Y6R6 833 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 CHURC1-FNTBB4DL54 471 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 RNF225M0QZC1 329 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 PGRMC2O15173 223 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 TEX28O15482 410 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 B4GALT5O43286 388 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ACSL4O60488 711 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 TCEA3O75764 348 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 HLA-DQA2P01906 255 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ASLP04424 464 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 UROSP10746 265 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ATF4P18848 351 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 KELP23276 732 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SRP54P61011 504 aaKnown RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SMAD3P84022 425 aaKnown RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 LCP2Q13094 533 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 CERCAMQ5T4B2 595 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 UBE2R2Q712K3 238 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 C12orf29Q8N999 325 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SRFBP1Q8NEF9 429 aaKnown RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 MCFD2Q8NI22 146 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 CENPNQ96H22 339 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SLC25A51Q9H1U9 297 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 BPIFA1Q9NP55 256 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 RIMS1Q86UR5 1692 aaKnown RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ATP6AP2A0A1C7CYW4 349 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SH3D21A4FU49 640 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 PER2O15055 1255 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 RGS10O43665 173 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SSNA1O43805 119 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SH3BGRLO75368 114 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ATP6AP2O75787 350 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 UGT2B17O75795 530 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 LDOC1O95751 146 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ARL2P36404 184 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 ELP6Q0PNE2 266 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 HKDC1Q2TB90 917 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 DUSP28Q4G0W2 176 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 GPR142Q7Z601 462 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 GIPC3Q8TF64 312 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 PIH1D2Q8WWB5 315 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 SPOCK2Q92563 424 aa6.98□□□□□ -1.29
CTNND1-236ENST00000533667 CLPTM1LQ96KA5 538 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms