RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 OR13J1Q8NGT2 312 aa17.34■□□□□ 0.37
NXF1-216ENST00000533499 TCEAL3Q969E4 200 aa17.34■□□□□ 0.37
NXF1-216ENST00000533499 FUBP1Q96AE4 644 aaKnown RBP17.34■□□□□ 0.37
NXF1-216ENST00000533499 HIC2Q96JB3 615 aa17.34■□□□□ 0.37
NXF1-216ENST00000533499 EBNA1BP2Q99848 306 aaKnown RBP17.34■□□□□ 0.37
NXF1-216ENST00000533499 GTPBP2Q9BX10 602 aaKnown RBP17.34■□□□□ 0.37
NXF1-216ENST00000533499 LGR4Q9BXB1 951 aa17.34■□□□□ 0.37
NXF1-216ENST00000533499 NUSAP1Q9BXS6 441 aaKnown RBP17.34■□□□□ 0.37
NXF1-216ENST00000533499 MRM3Q9HC36 420 aaKnown RBP17.34■□□□□ 0.37
NXF1-216ENST00000533499 NFU1Q9UMS0 254 aa17.34■□□□□ 0.37
NXF1-216ENST00000533499 SLC6A14Q9UN76 642 aa17.34■□□□□ 0.37
NXF1-216ENST00000533499 TMEM98Q9Y2Y6 226 aa17.34■□□□□ 0.37
NXF1-216ENST00000533499 FAM237BA0A1B0GVD1 139 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 GOLGA8KD6RF30 607 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 GOLGA8TH3BQL2 631 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 SCAMP1O15126 338 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 VILLO15195 856 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 VAPBO95292 243 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 GOT2P00505 430 aaKnown RBP17.33■□□□□ 0.36
NXF1-216ENST00000533499 PRSS56P0CW18 603 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 AKT1P31749 480 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 HOXD12P35452 270 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 PFN3P60673 137 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 YPEL5P62699 121 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 PEX6Q13608 980 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 PTK2BQ14289 1009 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 NFATC4Q14934 902 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 FASTKD3Q14CZ7 662 aaKnown RBP17.33■□□□□ 0.36
NXF1-216ENST00000533499 KIF19Q2TAC6 998 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 ANKRD20A4Q4UJ75 823 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 FASTKD1Q53R41 847 aaKnown RBP17.33■□□□□ 0.36
NXF1-216ENST00000533499 ZNF542PQ5EBM4 170 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 AFTPHQ6ULP2 937 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 ADAMTSL4Q6UY14 1074 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 MARK2Q7KZI7 788 aaKnown RBP17.33■□□□□ 0.36
NXF1-216ENST00000533499 PALM2Q8IXS6 379 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 DCLK2Q8N568 766 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 GPR161Q8N6U8 529 aaKnown RBP17.33■□□□□ 0.36
NXF1-216ENST00000533499 FAM174AQ8TBP5 190 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 PYROXD1Q8WU10 500 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 SEC14L1Q92503 715 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.33■□□□□ 0.36
NXF1-216ENST00000533499 FCRL3Q96P31 734 aaPredicted RBP17.33■□□□□ 0.36
NXF1-216ENST00000533499 PPANQ9NQ55 473 aaKnown RBP17.33■□□□□ 0.36
NXF1-216ENST00000533499 GDF3Q9NR23 364 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 ZDHHC18Q9NUE0 388 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 IL1RAPL1Q9NZN1 696 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 NFKBIL1Q9UBC1 381 aaPredicted RBP17.33■□□□□ 0.36
NXF1-216ENST00000533499 ANKRD6Q9Y2G4 727 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 ADAMTS9Q9P2N4 1935 aa17.33■□□□□ 0.36
NXF1-216ENST00000533499 MTX2O75431 263 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 SOD1P00441 154 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 MYCLP1P12525 358 aaPredicted RBP17.32■□□□□ 0.36
NXF1-216ENST00000533499 KELP23276 732 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 POLD2P49005 469 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 CDKN1CP49918 316 aaPredicted RBP17.32■□□□□ 0.36
NXF1-216ENST00000533499 ATXN3P54252 364 aaPredicted RBP17.32■□□□□ 0.36
NXF1-216ENST00000533499 TUBB4BP68371 445 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 XIAPP98170 497 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 CACNG1Q06432 222 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 THOC5Q13769 683 aaKnown RBP17.32■□□□□ 0.36
NXF1-216ENST00000533499 TCEA2Q15560 299 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 TPRG1LQ5T0D9 272 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 SNX20Q7Z614 316 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 IQCHQ86VS3 1027 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 NLRP8Q86W28 1048 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 PHYKPLQ8IUZ5 450 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 HID1Q8IV36 788 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 GSPT2Q8IYD1 628 aaKnown RBP17.32■□□□□ 0.36
NXF1-216ENST00000533499 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.32■□□□□ 0.36
NXF1-216ENST00000533499 OR4L1Q8NH43 312 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 GLYATL1Q969I3 302 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 C9orf72Q96LT7 481 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 WDR92Q96MX6 357 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 TTC25Q96NG3 672 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 FMO2Q99518 471 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 NAT9Q9BTE0 207 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 TEX101Q9BY14 249 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 FOXP3Q9BZS1 431 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 TREX1Q9NSU2 369 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 CATSPERZQ9NTU4 200 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 C20orf96Q9NUD7 363 aaPredicted RBP17.32■□□□□ 0.36
NXF1-216ENST00000533499 DNAJC28Q9NX36 388 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 RIMKLBQ9ULI2 386 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 SNX11Q9Y5W9 270 aa17.32■□□□□ 0.36
NXF1-216ENST00000533499 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.32■□□□□ 0.36
NXF1-216ENST00000533499 GAPDHSO14556 408 aaPredicted RBP17.31■□□□□ 0.36
NXF1-216ENST00000533499 EIF3HO15372 352 aaKnown RBP eCLIP17.31■□□□□ 0.36
NXF1-216ENST00000533499 USP1O94782 785 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 MAGEA4P43358 317 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 NXPH1P58417 271 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 IRX4P78413 519 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 OVGP1Q12889 678 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 GRIK2Q13002 908 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 NFATC2Q13469 925 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 SF3A2Q15428 464 aaKnown RBP17.31■□□□□ 0.36
NXF1-216ENST00000533499 ERCC6LQ2NKX8 1250 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 SPANXN3Q5MJ09 141 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 GPRC6AQ5T6X5 926 aa17.31■□□□□ 0.36
NXF1-216ENST00000533499 PEAR1Q5VY43 1037 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms