RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 BEST1O76090 585 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 ATG7O95352 703 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 SNAI1O95863 264 aaPredicted RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 ANXA5P08758 320 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 TCEA1P23193 301 aaKnown RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 CCNCP24863 283 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 AQP1P29972 269 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 CCR10P46092 362 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 PRKAG1P54619 331 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 PRKCZQ05513 592 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 FCHO2Q0JRZ9 810 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 USP41Q3LFD5 358 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 PPM1LQ5SGD2 360 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 RBM23Q86U06 439 aaKnown RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 SLC15A3Q8IY34 581 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 RAVER1Q8IY67 606 aaKnown RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 CRYBG2Q8N1P7 616 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 BPIFB6Q8NFQ5 453 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 SCLYQ96I15 445 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 BCO2Q9BYV7 579 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 PCDHAC1Q9H158 963 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 RAD21L1Q9H4I0 556 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 MRPL17Q9NRX2 175 aaKnown RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 MTF2Q9Y483 593 aaPredicted RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 MATN3O15232 486 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 ACSL4O60488 711 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 FGF1P05230 155 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 EFNA1P20827 205 aaPredicted RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 TSNQ15631 228 aaKnown RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 ATG14Q6ZNE5 492 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 ZNF276Q8N554 614 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 FAM47BQ8NA70 645 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 BORCS5Q969J3 196 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 OTUB1Q96FW1 271 aaPredicted RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 UQCC2Q9BRT2 126 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 TEX12Q9BXU0 123 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 S100A14Q9HCY8 104 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 CACNA2D2Q9NY47 1150 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 DYRK1BQ9Y463 629 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 TCAF1Q9Y4C2 921 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 RAI2Q9Y5P3 530 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 F5P12259 2224 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 DHRS12A0PJE2 317 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 TBC1D3BA6NDS4 549 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 FAM72CH0Y354 149 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 STMND1H3BQB6 276 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 RGS14O43566 566 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 STBD1O95210 358 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 SLC1A2P43004 574 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 GPR15P49685 360 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 SQLEQ14534 574 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 C6orf52Q5T4I8 152 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 FAM72AQ5TYM5 149 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 FAM72DQ6L9T8 149 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 PAOXQ6QHF9 649 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 FAM72BQ86X60 149 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 CAMK1DQ8IU85 385 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 ZNF558Q96NG5 402 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 CDK5RAP1Q96SZ6 601 aaKnown RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 ATG10Q9H0Y0 220 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 SYNDIG1Q9H7V2 258 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 MRPL39Q9NYK5 338 aaKnown RBP12.19□□□□□ -0.46
BDNF-218ENST00000533246 KIF13AQ9H1H9 1805 aa12.19□□□□□ -0.46
BDNF-218ENST00000533246 J3KR12 359 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 ENPP3O14638 875 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 WBP4O75554 376 aaKnown RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 TGDSO95455 350 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 UGT2B4P06133 528 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 IQCF3P0C7M6 154 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 ITPKAP23677 461 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 DGKAP23743 735 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 TRIM25Q14258 630 aaKnown RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 KCNJ11Q14654 390 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 ADRM1Q16186 407 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 INSCQ1MX18 579 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 FBXL19Q6PCT2 694 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 PHTF2Q8N3S3 785 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 TSPAN14Q8NG11 270 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 SIGLEC10Q96LC7 697 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 PANX3Q96QZ0 392 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 IRF2BPLQ9H1B7 796 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 IGFLR1Q9H665 355 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 PKMP14618 531 aaKnown RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 CYP2A7P20853 494 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 TACR2P21452 398 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 IVDP26440 423 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 SOX4Q06945 474 aaPredicted RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 CPNE9Q8IYJ1 553 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 PNPT1Q8TCS8 783 aaKnown RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 SPPL2BQ8TCT7 592 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 PMEPA1Q969W9 287 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 POMPQ9Y244 141 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 KCTD3Q9Y597 815 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 ARID1BQ8NFD5 2236 aaPredicted RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 PRMT5O14744 637 aaPredicted RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 TCEA3O75764 348 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 WDR47O94967 919 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 GOT2P00505 430 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms